| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0997 |
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| Symbol | |
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| ID | 4909380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 936789 |
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| End bp | 939128 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124747 |
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| Product | oligosaccharyl transferase, STT3 subunit |
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| Protein accession | YP_001055888 |
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| Protein GI | 126459610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGGA AAGAGAGGAT TCTCCTCGTC ACGTCGTCTC TGCTTGCCGC GTTTGCCATA
GCCTTATACG CAAGAATGTA CCGCGTCTTC CTATGGGGGT GGTGGCTCGA CGAGTTTGAC
CCATATGTCC GCTACTACTT GGCCAAGTAC ACGTTGGAGC ACGGCGCTGG GTGGTGGTGG
AGCGGTGCGC AGTTTTTACA GTTCTGGTAC CCCTACGGCG TCGATTGGGG CAAAGTTCTT
CTGCCGGGCA CCTCTTTCTA CGGCTTGTTT GTCTACGCGC TTCTCCGCCC ATTCGGCGTT
GATCTGTGGC ACGCCGTAGT AGCGGCGCCG GCGATTATGA ACTCTCTCGC CGTCTTCTCC
ATGTTCTACC TTGGGTACAA AGTGGGCCAG GAGCTGGGGG AGGGGGGTCT CAGAGTGGGG
CTGCTCTCTG CCATGCTTAC CGCCGTTATG CCCGCCTTCA TTGAGCGCGG CTTTGCCGCG
TGGTTCGACG ACGAGCCCAT AAGTCTTTTT CTAATACCCC TGGGCCTAGC CCTCTTGTTG
GACGGGCTGA GGAGGCCTTT GATGGGGGCT CTCGCCGGCG TAGCGCTTGG CTATGTGGCG
TGGACGTGGG GCGCGCACTT CTACGTGTGG AACTTGGTGG GCCTCTACGC GCTCCTCTTG
CCTACTTACT ACTTCCTAAA GCTCGCGTTT ACGCCGGCGG CGCCTTCTAA GGCGAAGAGG
GGGCCGGCGC CTCCTGCGGT CCAGCTCCCC TTTGACGCCA GGAACTTCTT CCTCTCCTAC
CTCCTCTTCT ACTTGCTCTA CGGCGTCTTC GTGGCCACAA TACCTAGATA CGGCGTAAAT
ACGCTCATAA GTGCCTTTAA CATTATCCCG ACCTTTGGCT TAGCCGCCGC CTTAGCTACA
TGGCTTTTAG ACTCAAAGCT CGGCGTTACG AGGACCGTGG AGCTCTTGAG GAGGTATATG
TGGCTCGTCG TGGCCGTGGT CCTCGCCGGC ATCGGCATAT TCGTAGCAGC GCTGGCCACA
GGCGCCATAG GGGGGAAGTA CCTCGCCACT CTTTTCCCCG TTGGTCGCTC CGCCATTGTG
GCCAGCGTGG CGGAGCACAG CACAACTTCC TTTGTTCAAA TTGTGGCTAG GTATGGCCCA
GTGTTGCCGT TTATACTCGC GGGGGTGCCC TACCTCTTCA CGCCCGGCGG CCTTTTGGCG
CTGTCCTACT TAGCCACGGC GGGCTACGCC GCAGCGACGA TGGTCCGCCT CCTCGTGCTA
CTGGCCCCCA TAGCCACTGT TGTGGCCGCT GTGGGCATTG CCAAGGCAAT GGAAAACAAG
AGGCTGGGCC TACTGGTGGC CCTCGCGGCT ATTATATCCG TGGCCATGTT GCTCTCCTCG
GTGATGCCCG CCCTCAATGC CCAGAGACTT AACTACGGCG AGGGGCTCGC GAGACAGCCT
ACGCAGATTG CAACGTCGGC CGTCGGCGTT GTAAGTGAGG ACTTCCTCGA CATGTTGATG
TGGATGAAGA CGAGGCTACC GATCTACGAG CCTGTGGCGT CGTGGTGGGA CTACGGCTAC
TGGATCTCGA TAATAGGCAA TAAGACGAGT CTCGCCGACA ATTCCACAAT AAACGCGACG
CAGATTGGGA AGATAGGCCT CGCGCTTATG GCCCCGCCGC AGGTAGGCGC AGAAATATTT
ACCAAGGACT TCCGCACGAA GTACGTCTTG GCGATAATGC CGTACATAGC CACTCCACTG
TCTGCGGGCT ATCTGCTTGT TCACGAATAC CCGCCCGGCG GCGACTTTTT AAAGTCCTAC
TGGATGGCGC GTATAGCGCT TGAGAACGTC GGCGATGCGG CCAAGATACT GGGCGCCACG
TCGACGAACT TCGAAGACTT CTTCTACACA AAGGTCATGA GCTACCCAGG CCCGCCGCCC
AGCGCCACGT ACGCCTATTT CACTATACAG GGGAGCTACT ACCCGGTCCC CCTCAGCTTA
AATAGGACGC TTTACGCTAT GTTGTTCAGC AAGGTTAGGC TTGTCCCCGC CTACGGCAAC
GCCACCGAGC AGTACGCGTG GATGTTCGAG GGCGTGTATC AACAAGGCGT CTTCACCACG
TTTAGAGACC TCAAGCTGAC GGGGGGCAAC GTGTACCTGC CCGGGTATGC GCCAAGGCTG
GCAGGGGCTC TCCAGTACAC AATACAGGGG TGGACCTCCG GGAGCGTGGA GGTGGTGGCC
GACCCGCTTA CTGGCGCAAA GGAGCAGGTG CCGTTTATTA CAACGGCGAC GAGGCCTCTG
AGGCTTGTCT ACGTCTCTAG GCCCCATGGG TGGGTTGTGC TGTACGAAGT GGGGCCGTGA
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| Protein sequence | MDRKERILLV TSSLLAAFAI ALYARMYRVF LWGWWLDEFD PYVRYYLAKY TLEHGAGWWW
SGAQFLQFWY PYGVDWGKVL LPGTSFYGLF VYALLRPFGV DLWHAVVAAP AIMNSLAVFS
MFYLGYKVGQ ELGEGGLRVG LLSAMLTAVM PAFIERGFAA WFDDEPISLF LIPLGLALLL
DGLRRPLMGA LAGVALGYVA WTWGAHFYVW NLVGLYALLL PTYYFLKLAF TPAAPSKAKR
GPAPPAVQLP FDARNFFLSY LLFYLLYGVF VATIPRYGVN TLISAFNIIP TFGLAAALAT
WLLDSKLGVT RTVELLRRYM WLVVAVVLAG IGIFVAALAT GAIGGKYLAT LFPVGRSAIV
ASVAEHSTTS FVQIVARYGP VLPFILAGVP YLFTPGGLLA LSYLATAGYA AATMVRLLVL
LAPIATVVAA VGIAKAMENK RLGLLVALAA IISVAMLLSS VMPALNAQRL NYGEGLARQP
TQIATSAVGV VSEDFLDMLM WMKTRLPIYE PVASWWDYGY WISIIGNKTS LADNSTINAT
QIGKIGLALM APPQVGAEIF TKDFRTKYVL AIMPYIATPL SAGYLLVHEY PPGGDFLKSY
WMARIALENV GDAAKILGAT STNFEDFFYT KVMSYPGPPP SATYAYFTIQ GSYYPVPLSL
NRTLYAMLFS KVRLVPAYGN ATEQYAWMFE GVYQQGVFTT FRDLKLTGGN VYLPGYAPRL
AGALQYTIQG WTSGSVEVVA DPLTGAKEQV PFITTATRPL RLVYVSRPHG WVVLYEVGP
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