Gene Pcal_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0987 
Symbol 
ID4909725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp931688 
End bp932014 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID640124737 
Producthypothetical protein 
Protein accessionYP_001055878 
Protein GI126459600 
COG category[R] General function prediction only 
COG ID[COG2118] DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGG CCGAGGATAG AGAGCTTGAA GAACTTAGAA GGAAAAAGCT CGAGGAGCTA 
CAAAAGAGGG CAGAGGCAGA GCGGCAGGCG CAAATAGCGG CGGCCCAGAG GAGGGCAGTG
CTCAAGAGGA TACTAACGCC GGAGGCCTTG GCGAGGCTAG ACAACATTAG AGTCGTAAGG
CCGGACATCG TGGAGGCGCT GGAGCAACAA TTGATCTCCC TGGCCTCCTC TGGAAGAGTA
AAAGTGCCAA TAGACGACGA GACTTTGAAG AAGATCCTAG AGGCTGTGTA CAGCCAAACC
CGGCAAGAGT ACAGATTCCG ACTCTGA
 
Protein sequence
MAEAEDRELE ELRRKKLEEL QKRAEAERQA QIAAAQRRAV LKRILTPEAL ARLDNIRVVR 
PDIVEALEQQ LISLASSGRV KVPIDDETLK KILEAVYSQT RQEYRFRL