| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0986 |
|---|
| Symbol | rpl39e |
|---|
| ID | 4909621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 931501 |
|---|
| End bp | 931656 |
|---|
| Gene Length | 156 bp |
|---|
| Protein Length | 51 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640124736 |
|---|
| Product | 50S ribosomal protein L39e |
|---|
| Protein accession | YP_001055877 |
|---|
| Protein GI | 126459599 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAA ACAAGCCGCT GGGCAAGAAG CTTAGGCTCG CCGCGGCTTT AAACAGCAAC
AGAAACCCTC CCCTGTGGGT CATCGCCAAG ACAAAAAGGA GGGTTACTAG GTCCCCCGCG
AGGCGGCACT GGAGAAGGCA GAAGTTAAAG GCTTGA
|
|---|
| Protein sequence | MARNKPLGKK LRLAAALNSN RNPPLWVIAK TKRRVTRSPA RRHWRRQKLK A
|
|---|
| |