| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0970 |
|---|
| Symbol | |
|---|
| ID | 4908173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 915687 |
|---|
| End bp | 916586 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640124719 |
|---|
| Product | asparaginase |
|---|
| Protein accession | YP_001055861 |
|---|
| Protein GI | 126459583 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1446] Asparaginase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.125633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGT TAGTTGTCCA CGGAGGGGCC GGGCGGTGGG CGGTAAGTGA AGAAAAGAGG
CAGGCGGTTA AGAGGGCGTT GGAGGACGCG GTGAGGGAGG GCCTTGCGGC GATGCTAAGG
GGCGGTGCAG TGGACGGCGT AGTGGCGGCC GTGGAGTATA TGGAGGCCAG CGGCTTGTTC
AACGCGGGCT ACGGCTCTGT CTATGCGCTG GACGGGCGAG TCTACATGGA TGCCGGCATT
ATGGACGGCA AGACCGGCAG AGCGGGGGCG GTCGCCGCCG TCGAAGGGGT GAAAAGCGCC
GTGCGGCTTG CCCGCGCCGT CATGGAGTTG ACAGACCACG TCATTTTGGC GGGGGAGGGG
GCCACGCTTT TGGCGAAGAG GCTTGGCCTA ACTGCTCCCT TTTACAAGTT TTACAGCGAG
GAGAAGAATA GGCAGTTTAG CCAAGTTCTT GAGGAGGCCA GGCAGGGCAA GTGGCATTTC
AAGAGGGTTC TAGATTTTGC AGACACTGTG GGCGCCGTGG CTTTAGACAA AGATGGGAAC
TTAGCCGCCG CCACGTCCAC CGGGGGCGTG TGGCTGAAGC TACCAGGCAG AGTGGGAGAT
AGCCCACTGC CTGGGGCGGG CTTTTGGGCT GAGAACGGCG TTGGCGCCTT TAGCGCGACT
GGCGTAGGCG AAGTGATTAT ACTCTCCACG CTTTCTCTAC GCGCTAGAGA TTTGCTTGAG
CAGACGGGCG ACATACGCGC GGCCGTGGAG AAGGCCGTGG AGTACGTCAC TCGGAGGTTT
GGGCCAGACA CGGCGGGCTT GATAGGCGTA GACGCCAGGG GGCGCTTCGC GTTTAGCTAC
AACACTAGGG CAATGGCGAG GGGGTGGGGA AAACCGGGGG AGGTACGGGC GGAGCTTTAA
|
|---|
| Protein sequence | MTTLVVHGGA GRWAVSEEKR QAVKRALEDA VREGLAAMLR GGAVDGVVAA VEYMEASGLF
NAGYGSVYAL DGRVYMDAGI MDGKTGRAGA VAAVEGVKSA VRLARAVMEL TDHVILAGEG
ATLLAKRLGL TAPFYKFYSE EKNRQFSQVL EEARQGKWHF KRVLDFADTV GAVALDKDGN
LAAATSTGGV WLKLPGRVGD SPLPGAGFWA ENGVGAFSAT GVGEVIILST LSLRARDLLE
QTGDIRAAVE KAVEYVTRRF GPDTAGLIGV DARGRFAFSY NTRAMARGWG KPGEVRAEL
|
|---|
| |