| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0936 |
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| Symbol | |
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| ID | 4909187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 886139 |
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| End bp | 886867 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124684 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001055827 |
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| Protein GI | 126459549 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGC CAGCCATGGC AGGCTATGAT AGGGCAATAA CGATATTCTC ACCTGAGGGC
AAGATATACC AAGTGGAATA CGCCGGCGAG GCAGTGAAGC GGGGGTGGCC CACCGTGGGC
GTCAAGTGCA AAGGCGGCGT GGTGTTGGCG GCAGAGAAGA GGAAGATCTC AGCCTTGTTC
GACCCCACGT CGCTTGAGAA AATATACCTA GTGGACGAGC ATGTGGCAAT ATCGCCGTCT
GGGCTTCTGG CAGACGCAAG AATATTGATA GACTACGCAA GAGATGTGGC GCTGAGCCAC
AGATTTATCT ACGACGAGCC CATAGACGTC GAGTATTTGA CGAAGGCGGT GTGTAACCTT
AAGCAACAAT ATACACAGTT CGGCGGCGCG AGGCCGTTTG GAGTGGCTCT GCTAATAGCG
GGCATCGACG GGCGGGGCGC ACGCCTATTT CAAACAGACC CATCTGGCGT ATATATCGGC
TACTACGCCA CGGCAATAGG CGCCGATTCT AGCACAATAA TGGAGTTTCT AGAGAAGAAC
TACAAACACG ACTTAGACAT CGGCGGCTGT GTAGAGCTCG CAGTTAGGGC TCTGGCCACC
GCAGTGGAGA TAAGCGACGG CACAAACGTG GAAGTGGCTT ACGCCACAGT GGAGGAGAAG
AGAGTAAAGA AGATGACGCC GGAGGAGGTG ACCGAATTAA TAAACAAGCT CGGCCTTAAG
AAGGCCTAG
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| Protein sequence | MFPPAMAGYD RAITIFSPEG KIYQVEYAGE AVKRGWPTVG VKCKGGVVLA AEKRKISALF
DPTSLEKIYL VDEHVAISPS GLLADARILI DYARDVALSH RFIYDEPIDV EYLTKAVCNL
KQQYTQFGGA RPFGVALLIA GIDGRGARLF QTDPSGVYIG YYATAIGADS STIMEFLEKN
YKHDLDIGGC VELAVRALAT AVEISDGTNV EVAYATVEEK RVKKMTPEEV TELINKLGLK
KA
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