Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0925 |
Symbol | |
ID | 4909124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 878470 |
End bp | 879537 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640124673 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001055816 |
Protein GI | 126459538 |
COG category | [R] General function prediction only |
COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGAGA GGCTTAGGTG GTACTACGCC GTTATGCGGA ACATTGCGCC AGCCAAATAC CACATTGCGG CTAGGGTTGA GGCCCCCCGT GACTTTGCGG CAATGGGCGA CGGGGAGCTG TGGAAGTTGC ACGAGGAGCT GGGCCGCGTC TTTGACGAGG CGTGGGCTGA GCAGAGGGCG AGGCCGGACT TCTCCCTTGC CTCTAGGGGG CTCCCAGAGG CCTCGTTTTT GGATGTGAAG ATTGAGCTTG CTGAGAGGCA GTTGAGGAGG TGTATGTTGT GCGAACGAAG GTGCGGCGTC GATAGAACTA GGGGGAGGGG GGCGTGTCTC TTGGACGCCA GGGCCAGAGT TGCGTCGTTT TTCCACCACT TGGGCGAAGA GGCACCGCTG GTGCCCTCTG GCACGATCTT CTTCGCCGGG TGCAATTTCA GATGCGTTTA CTGCCAGAAC TGGGACATAT CGCAGGACCC CGAGGCAGGC GTCGAGGTTA CGGCTGAGGC CCTCGCGGCG ATGCAGATCC GCCTCAGGGA GGAGGGGGCG AGGAACATCA ACTGGGTCGG CGGCGAGCCC ACTCCTAATA TACCCTGGAT ATTGAAGTCG CTCAAGATTT TGGCCCGCCG CGGCGTCAAT GTGCCACAGC TCTGGAACTC AAACATGTAC CTAACCCCCG AGGGGCTCTC CCTCATCCTC CACGTAATTG ATATCTGGCT TCCCGACTTC AAGTATGGGA ACAACGCCTG CGCTTTGCGG TACTCAGTGG CGCCTAGGTA TTGGGAGGTC GTCACGCGCA ACTTCTCAGT TATATGCAGG AGGGGGGAGG ACATAATTGT ACGCCACTTG GTCCTCCCTG GCCACGTGGA GTGTTGTACA AAGCCTGTCC TCAAGTGGCT TGCCGAGAAC TGCCGCCACG CCCTTGTCAA CATAATGGAC CAGTACAGGC CTGAGTACCT TGTGCCAAAG TTGGACAAGT ACAAGGAGAT TAGGAGGCGC GTCTCCGAGG AGGAGATGGA GGAAGCCTAC AAGTACGCAG ACGCCCTCGG CTTGGCGTGG AGAGAGGTAA CCCGCTAG
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Protein sequence | MRERLRWYYA VMRNIAPAKY HIAARVEAPR DFAAMGDGEL WKLHEELGRV FDEAWAEQRA RPDFSLASRG LPEASFLDVK IELAERQLRR CMLCERRCGV DRTRGRGACL LDARARVASF FHHLGEEAPL VPSGTIFFAG CNFRCVYCQN WDISQDPEAG VEVTAEALAA MQIRLREEGA RNINWVGGEP TPNIPWILKS LKILARRGVN VPQLWNSNMY LTPEGLSLIL HVIDIWLPDF KYGNNACALR YSVAPRYWEV VTRNFSVICR RGEDIIVRHL VLPGHVECCT KPVLKWLAEN CRHALVNIMD QYRPEYLVPK LDKYKEIRRR VSEEEMEEAY KYADALGLAW REVTR
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