Gene Pcal_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0923 
Symbol 
ID4908606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp876980 
End bp877744 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID640124671 
Productbeta-aspartate methyltransferase 
Protein accessionYP_001055814 
Protein GI126459536 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAGA GGGGGGACTG GGCGCTTCTC TTGGAGGTGG GGGGCGGGTA CAGGACTGTG 
GCTAAAGTCG GCGGGGGTGT TGTGCAGACT ATTAGGGGCT TTTTGGACCT GGACGCGTTG
GTGGGGGCGC CTTACGGCTC TGTCTTGTCC TCTTCTCTCG GCGTTAGGTT TATGGCTCTT
CCTGCGACGA TTTTCGACGT AATTGAGCAC CGCTTCAAGC GTAAGGCGCA AGCCATTTAC
CCGAAGGACG CGGTGCACAT TGTGAGAGTG GCTGGGGTTG GCCCTGGGTC TAGGGTGGCT
GAGGCGGGGA CTGGCTCTGG CTTTTTGACG GCTGTGTTGG CGTGGTACGT CCGCCCGTGG
GGGGTCGTCT ACAGCTTTGA GAGGAGGCTT GACCACTTGA GGGTGGCTGT GGATAATATA
AGGAGCGTGG GGCTTGACCC GTATGTGGAA CTGCAACTTA GGGACGTCTC TGCCTCTGGC
TTTGGGCTCG CGGGGTTAGA CGCCGTGGTT TTAGACATGG GCGACCCCTG GGCGGCTGTC
CCCTACGCCA AGGAGGCGCT GAAGCCGGGC GGCGCGTTGG CGATCTTTTC CACCACGGTG
GAACACTTGG TGAAGAGCCT CGCAGCTGTG GAGGAGGCAG GGTTCTGCGA AGTGTCTGTG
GAGGAGGTCT TGGCGAGGAG GTGGAAGCCG ACGCTGGGCG AGGTAAGACC GGAGACTTTC
GGCGTGGTGC ACACGGGGTG GATTATCGCC GCGAGGAACT GCTGA
 
Protein sequence
MFKRGDWALL LEVGGGYRTV AKVGGGVVQT IRGFLDLDAL VGAPYGSVLS SSLGVRFMAL 
PATIFDVIEH RFKRKAQAIY PKDAVHIVRV AGVGPGSRVA EAGTGSGFLT AVLAWYVRPW
GVVYSFERRL DHLRVAVDNI RSVGLDPYVE LQLRDVSASG FGLAGLDAVV LDMGDPWAAV
PYAKEALKPG GALAIFSTTV EHLVKSLAAV EEAGFCEVSV EEVLARRWKP TLGEVRPETF
GVVHTGWIIA ARNC