| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0920 |
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| Symbol | |
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| ID | 4909526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 875276 |
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| End bp | 875818 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124668 |
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| Product | ribosomal biogenesis protein |
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| Protein accession | YP_001055811 |
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| Protein GI | 126459533 |
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| COG category | [A] RNA processing and modification
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2136] Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGAG GCTGCAAAGC GCTGATAACC ACCTCCCGCT CCCCCTCCAA GCGCACTCTA
GAGCTTGTAA ACGACCTCGC CAACTCTCTG CCGGGCGTCA GAAAGGTGGT AAGAGGGAAG
CGGCCGTTCA CCGTCCTGCT GGAAGAGGCC GTCCAGTGCG GCGCGCGGCA CGTGGTGTTG
ATATGGGAGA GGAGGGGCAT GCCCTACGCC GTCTTGTTCT ACGACATAGC CCAGCGAAGG
TGGAAGCCCT ACGCCCTAAA AATCGCCGGC GTAAGAAGCA GGCGGGACTT CCCAGCCTTC
GTCGCCAGAA GGCCGCCGGC CAAGACCGCA GTCGTGGTAG ACCTAGCACA GAGCGAGGTT
GGGGAAATAT TCTCAGAGGT CTTCGGCTAC CCCCTCCTAT ACAGCTTAGA CGTGAGGGGC
TTCGACACAA TAATTCTAGT GAGAAGAGGA GACGGCCACC TAGTAGTGGA ATTCCTAGGA
CCAGACATGG GCCCCCGCGC CTCCTCCATA AAAGTTGCCA AGGTGGTTTA CCGCCGTGTA
TAA
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| Protein sequence | MEGGCKALIT TSRSPSKRTL ELVNDLANSL PGVRKVVRGK RPFTVLLEEA VQCGARHVVL
IWERRGMPYA VLFYDIAQRR WKPYALKIAG VRSRRDFPAF VARRPPAKTA VVVDLAQSEV
GEIFSEVFGY PLLYSLDVRG FDTIILVRRG DGHLVVEFLG PDMGPRASSI KVAKVVYRRV
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