Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0901 |
Symbol | |
ID | 4910281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 858051 |
End bp | 859073 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640124649 |
Product | hypothetical protein |
Protein accession | YP_001055792 |
Protein GI | 126459514 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGAGGA TCAAGCTGGC CTTCGCCGGC AGAGAGACGG AGTTTACAGA CAGAGACGTG GCCCTGGAGC AAATAGCCAA GCTAGCCGAG AGAGGCACCT ACACAGTACA CGTCGTGTAC GGCCCCGAGG GCTGTGGCAA GACGGCCCTC CTCAAACAAG CCAAGGCCGT CCTAGAGGAG GAGTTCAGCT ACCACGTCTT ATACGCCAAT CCTCTAGCCA AGAGGGCTGA GGAAATCCTC CAATACTCTC CCTCGGCGAG GGAGCTTGTG GAGAAGGCAT TCAGCGTATT CTCTGACCCA TTAGCCAAGG CCGTAGACCT GGTAATAAAC GTGGCAGGGT GGATAATCCA AAAATTCCAC AAGGCAAAGG TTGCGGTCCT CATGGACGAC ATATTCCAAG CCATTGGAGT TGAGAATGCA GAGGCCTACG TCAAAGCTCT ACTCAACTTG ATAGAGTGGC CACCCGCCGA ATACGACAAA ATAGTCGTGC TAGTGGCGTC GAGTGAAGGC GTCACGAGGG AGCGTGTGGG TCGGCACAGC TGGGCCACTA TTTTTGTAAC GTGGAACATG GCGAGGGAGG GCTTTCGCCA GTTGTATGAA ACGCTACCCG ACCCCAAGCC TCCCTTCGAC GAAGTGTGGA AGTGGACAGG CGGTAACCCA AGGTTCTTGG AAAGACTCTT CGAAACTAGG TGGGACGTGG AACAACTGGT GGAGAGGCTC GTAATATCCA AAAGCCTCTA TGATGTAGTG TCTGGACTAG ACAGCGTCAA GCTTGAAGTT CTCAAAGAGG CTGTGGAAGA CCCCGACGTG ATATTTAGGA GGATTGGGGA GAGGGAGGTG CAAGAGCTTA GGGACATGCT CGTCGAGAAG AACTTGATTG TTAGGGTATG GGATCGCAAG CCATACCTCT GGGTCGACCA GCCGCCCCCC GAGAAAGACC CAGAGCTAGG CATTGGGAAG CACTACGCGT GGCAAACCCC ACTACATAGA GAGGCTGTGA AAAAGGCGTT AGAGGTGGCG TAG
|
Protein sequence | MKRIKLAFAG RETEFTDRDV ALEQIAKLAE RGTYTVHVVY GPEGCGKTAL LKQAKAVLEE EFSYHVLYAN PLAKRAEEIL QYSPSARELV EKAFSVFSDP LAKAVDLVIN VAGWIIQKFH KAKVAVLMDD IFQAIGVENA EAYVKALLNL IEWPPAEYDK IVVLVASSEG VTRERVGRHS WATIFVTWNM AREGFRQLYE TLPDPKPPFD EVWKWTGGNP RFLERLFETR WDVEQLVERL VISKSLYDVV SGLDSVKLEV LKEAVEDPDV IFRRIGEREV QELRDMLVEK NLIVRVWDRK PYLWVDQPPP EKDPELGIGK HYAWQTPLHR EAVKKALEVA
|
| |