Gene Pcal_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0901 
Symbol 
ID4910281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp858051 
End bp859073 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID640124649 
Producthypothetical protein 
Protein accessionYP_001055792 
Protein GI126459514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGGA TCAAGCTGGC CTTCGCCGGC AGAGAGACGG AGTTTACAGA CAGAGACGTG 
GCCCTGGAGC AAATAGCCAA GCTAGCCGAG AGAGGCACCT ACACAGTACA CGTCGTGTAC
GGCCCCGAGG GCTGTGGCAA GACGGCCCTC CTCAAACAAG CCAAGGCCGT CCTAGAGGAG
GAGTTCAGCT ACCACGTCTT ATACGCCAAT CCTCTAGCCA AGAGGGCTGA GGAAATCCTC
CAATACTCTC CCTCGGCGAG GGAGCTTGTG GAGAAGGCAT TCAGCGTATT CTCTGACCCA
TTAGCCAAGG CCGTAGACCT GGTAATAAAC GTGGCAGGGT GGATAATCCA AAAATTCCAC
AAGGCAAAGG TTGCGGTCCT CATGGACGAC ATATTCCAAG CCATTGGAGT TGAGAATGCA
GAGGCCTACG TCAAAGCTCT ACTCAACTTG ATAGAGTGGC CACCCGCCGA ATACGACAAA
ATAGTCGTGC TAGTGGCGTC GAGTGAAGGC GTCACGAGGG AGCGTGTGGG TCGGCACAGC
TGGGCCACTA TTTTTGTAAC GTGGAACATG GCGAGGGAGG GCTTTCGCCA GTTGTATGAA
ACGCTACCCG ACCCCAAGCC TCCCTTCGAC GAAGTGTGGA AGTGGACAGG CGGTAACCCA
AGGTTCTTGG AAAGACTCTT CGAAACTAGG TGGGACGTGG AACAACTGGT GGAGAGGCTC
GTAATATCCA AAAGCCTCTA TGATGTAGTG TCTGGACTAG ACAGCGTCAA GCTTGAAGTT
CTCAAAGAGG CTGTGGAAGA CCCCGACGTG ATATTTAGGA GGATTGGGGA GAGGGAGGTG
CAAGAGCTTA GGGACATGCT CGTCGAGAAG AACTTGATTG TTAGGGTATG GGATCGCAAG
CCATACCTCT GGGTCGACCA GCCGCCCCCC GAGAAAGACC CAGAGCTAGG CATTGGGAAG
CACTACGCGT GGCAAACCCC ACTACATAGA GAGGCTGTGA AAAAGGCGTT AGAGGTGGCG
TAG
 
Protein sequence
MKRIKLAFAG RETEFTDRDV ALEQIAKLAE RGTYTVHVVY GPEGCGKTAL LKQAKAVLEE 
EFSYHVLYAN PLAKRAEEIL QYSPSARELV EKAFSVFSDP LAKAVDLVIN VAGWIIQKFH
KAKVAVLMDD IFQAIGVENA EAYVKALLNL IEWPPAEYDK IVVLVASSEG VTRERVGRHS
WATIFVTWNM AREGFRQLYE TLPDPKPPFD EVWKWTGGNP RFLERLFETR WDVEQLVERL
VISKSLYDVV SGLDSVKLEV LKEAVEDPDV IFRRIGEREV QELRDMLVEK NLIVRVWDRK
PYLWVDQPPP EKDPELGIGK HYAWQTPLHR EAVKKALEVA