| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0900 |
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| Symbol | |
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| ID | 4910244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 856335 |
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| End bp | 858029 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124648 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001055791 |
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| Protein GI | 126459513 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGGG TTAGGATACG CTCTCCGTCG TGGTACGACG GCGTAGACAA CGCGCCGCAT
AGGGTGTACC TAAGGGCCGT GGGGTTTACA GAGGAGGACT TCTCCAAGCC CCTGGTGGGG
GTAGCTGTGT CTTGGTCAGA GTTGGGGCCG TGCAACTACC ACACGCTGGA GCTTGCGCGG
TACGTCAAAG AGGGGGTCAA GGAGGCGGGC GGCGCGGCGC TTGCGGCGCC CACCATTGTG
GTAAACGACG GCATTAACAT GGGGACGCCG GGCATGCGGT ACTCGCTGAT CAGCCGGGAG
CTGATCGCCG ACTCGATAGA GGCGCAGTTC AACGCACATG GGGTAGACGC TTGGGTTGGG
ATTGGGGGCT GCGACAAGAC TCAGCCCGGC ATCATCATGG CCATGGTGAG GCTGAACTTG
CCCTCGGTGT ACTTATACGG CGGCTCCGCC GAGGCAGGGT GGCTGGGGGA GAGAGAGCTC
ACCGTGGAAG ACGTGTTTGA GGCCGTGGGG GCCTACTACG CGGGGCGGAT TACTCTTGAG
GAGCTCAAGA GAGTGGAAGA GCTCAGCTTC CCCACATACG GCACGTGCCA GGGCATGTTC
ACGGCGAACA CCATGGCCCT CTTGGCAGAG GCCATGGGAG TCTCCCTCCT GGGCTCGGCC
ACGCCCCCCG CCACGTCGGC TAGGCGCAGG AAGTTCGCAG TGGAGTCGGG CAAAGCCGCC
GTGAGAGCCC TAGAGCTTGG AATTAAGCCG AGAGACGTCG TCACCTACGA CGCACTGTAC
AACGCGGCAG TCGCGCTATT CGCCACCGCG GGGTCCACCA ACGCCATACT CCACCTCCTA
GCCATCGCCC ACGAGGCCGG TGTCAAGTTC GCCCTCGAAG ACTTCGACAA AATTGGGAAA
AGGGTGCCGG TGATAGCCGC GCTTAGGCCG GCGGGGCCCT ACGCCATGCA GGACTTAGAC
AGAGTTGGCG GAGTCCCCAG GCTTTTGAAA AAGTTGTACA AGGCGGGCCT CCTGAGGGGC
GAGGCCCTCA CCGTAGAGGG GGAGCCCATC GGCAAACTGC TCGAGCGCTG GGAGCCGCCC
GCCGTGCCAG AGGCCGGCGT GCTGTACGAC GTAGATAGGC CGTACAAGCC CCACGGGGGC
ATTAGGATAC TGTGGGGCAA CTTGGCGCCC CGCGGCGCAG TGATGAAGAT AGGCGCCGCC
GAGGTTCTAA AGTTCGAGGG GAAGGCCCTC GTCTTCGACG GAGAGGCCGA GGCCTTCAAG
GCAGTGGCGG CTGGAGAGGT GAAGCCGGGT CACGTGGTAG TCATACGCTA TGAGGGGCCC
AAGGGCGCGC CCGGGATGCC CGAGATGTTG AAAGTCACCG CCGCCATTGT AGGCGCCGGG
CTGGGCGAGT CCGTGGCGCT TGTGACAGAC GGGAGGTTCT CGGGGGCCAC CAGGGGAATC
ATGGTGGGCC ACGTGGCGCC CGAGGCGGCC GCAGGCGGCC CAATTGCGCT TGTAGAAAAC
GGCGACCGGA TAGTCATCGA CGGCGAAGCC GGTCTGCTCA AGCTAGACGT ATCAGACGAA
GAGCTAGAAC GCCGCAGAAG GCAGTGGACG CCCCCACCGC CTAAGTACAA AGGCGGCCTC
TTGGCAAAAT ACGCCGCGTT GGTGTCACAA GCAGACCAAG GCGCCGTCAC AACCCCAGAA
ACCTGCCAGT GTTAG
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| Protein sequence | MVRVRIRSPS WYDGVDNAPH RVYLRAVGFT EEDFSKPLVG VAVSWSELGP CNYHTLELAR
YVKEGVKEAG GAALAAPTIV VNDGINMGTP GMRYSLISRE LIADSIEAQF NAHGVDAWVG
IGGCDKTQPG IIMAMVRLNL PSVYLYGGSA EAGWLGEREL TVEDVFEAVG AYYAGRITLE
ELKRVEELSF PTYGTCQGMF TANTMALLAE AMGVSLLGSA TPPATSARRR KFAVESGKAA
VRALELGIKP RDVVTYDALY NAAVALFATA GSTNAILHLL AIAHEAGVKF ALEDFDKIGK
RVPVIAALRP AGPYAMQDLD RVGGVPRLLK KLYKAGLLRG EALTVEGEPI GKLLERWEPP
AVPEAGVLYD VDRPYKPHGG IRILWGNLAP RGAVMKIGAA EVLKFEGKAL VFDGEAEAFK
AVAAGEVKPG HVVVIRYEGP KGAPGMPEML KVTAAIVGAG LGESVALVTD GRFSGATRGI
MVGHVAPEAA AGGPIALVEN GDRIVIDGEA GLLKLDVSDE ELERRRRQWT PPPPKYKGGL
LAKYAALVSQ ADQGAVTTPE TCQC
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