| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0893 |
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| Symbol | |
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| ID | 4909928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 850517 |
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| End bp | 851320 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124642 |
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| Product | transketolase subunit A |
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| Protein accession | YP_001055785 |
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| Protein GI | 126459507 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAGAG GGGTTTCAGA ATTGGCGCCG CTGACGTGCA AGGCGCGTAG GTACATATTG
CTCATGGCGG CCTACGACCC CGGCATGCAC CTCGGCTCCT CGCTCTCCGT GCTAGAGATA
TTGGCGGCGC TGTACGGCAC AGGCCGCGTC AAATTCAACG TGGCAAACGG CGTCAAGAAT
AGGAACTACC TCGTTCTCTC AAAGGGACAC GCCGTACACG CCATCTACGC CATTGCTGCA
GCAATGGGGC ACTTGACCAT CGACGAGCTG AGAGAGACCG GCAGCCTTGG AAGCCGCCTC
CAAAACCACC CAGAGGTCGA CACCCCCTAC GTGGACGTGC CTAACTCAGG CTCTCTCGGC
CAAGGCATAA GCCTCGCCGT GGGCCTGGCG CTGGGCCTCC GCCTAAGGGG GGAGGAGGGC
AGAGTGTACC TAGTGACGGG GGACGGCGAG CTCGACGAGG GGCAGAGCTG GGAGTCCTTC
GCCGTGGCGG CCCACTACGG GTTAAACAAC CTTGTCACAA TAGTAGATTT AAACGACGTA
CAGTTGGACG GCCACAGCCA CGAGGTGTTG AAGAAGGGAG ACTTGGCTGG GCGGTTCAAG
TCGCTGGGCT TTGAGGTACT GCAGGTGGAC GGCCACGACG TGAGAGAAGT TGTTGAGGCT
TTTGAGAAGG CGGAGAAGAG CGACAGGCCT GTGGTCATCT TGGCGAAGAC CGTAAGAGGG
AGAGGCGTGC CGTCTATTGA GGACACCGCA AAGCAGAGGC TCCCCCGCGA CGAGGCGCTG
AGCTACGCAA ATGGGCCATG TTAG
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| Protein sequence | MERGVSELAP LTCKARRYIL LMAAYDPGMH LGSSLSVLEI LAALYGTGRV KFNVANGVKN
RNYLVLSKGH AVHAIYAIAA AMGHLTIDEL RETGSLGSRL QNHPEVDTPY VDVPNSGSLG
QGISLAVGLA LGLRLRGEEG RVYLVTGDGE LDEGQSWESF AVAAHYGLNN LVTIVDLNDV
QLDGHSHEVL KKGDLAGRFK SLGFEVLQVD GHDVREVVEA FEKAEKSDRP VVILAKTVRG
RGVPSIEDTA KQRLPRDEAL SYANGPC
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