Gene Pcal_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0888 
Symbol 
ID4909692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp846394 
End bp846834 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content54% 
IMG OID640124637 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001055780 
Protein GI126459502 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CGCTTAAGGT GAACGGAAAC ATACACGAGG TAGAAGTAGA GCCCAGGAGG 
CTGTTGGTAC ACGTACTTAG GGAGCTGGGC TACACCTCTG TTAAAGTAGG TTGCGACACG
GCGACGTGTG GCGCGTGTAC AGTGTTGATG AACGGCAGGC CTGTCAAAAG CTGTAACGTG
TTGGCCGTCC AAGCAGACGG CGCTGAGATC ATCACGGCTG AGTACAGCGA CGAGCTCATG
GAGAAGATAA GGGAGGCGTT TAAGAGGAAC CACGCGGCTC AGTGCGGCTA CTGCACCTCG
GGCATGCTCA TATCTGCCTA CCACTTGGCC AAGTCCGGCG CCAAGAGCGA GGAGGAGGTT
GTGGAGGGGA TAAGCGGAAA TCTGTGCAGG TGCACGGGAT ATCAAAACAT CATAAACGCC
ATAAAGGAGG TGTTGGTATG A
 
Protein sequence
MKITLKVNGN IHEVEVEPRR LLVHVLRELG YTSVKVGCDT ATCGACTVLM NGRPVKSCNV 
LAVQADGAEI ITAEYSDELM EKIREAFKRN HAAQCGYCTS GMLISAYHLA KSGAKSEEEV
VEGISGNLCR CTGYQNIINA IKEVLV