Gene Pcal_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0883 
Symbol 
ID4908144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp840679 
End bp841791 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID640124632 
ProductPhoH family protein 
Protein accessionYP_001055775 
Protein GI126459497 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACA AGCTTAAGCC GATGACTGTG GGGCAGGAGC GTGCTGTAAA TGTGCTAAGG 
GACCCTGAGA ACGAGCTTGT GGGTCTCTTT GGGCCCACTG GGACTGGCAA GTCGCTTTTG
AGCATTGCCT ACGGCATTTG GGCTGTGGAG AATGGGAAGG CTAAGCGGTT TATCATCGCG
CGTCCAATCG TGGACGTGTC GACGGGGGAG ACTCTGACGC CGGAGCGTCT CGGAGACATG
TACTACAGAA TAGCCTCGGC GTACTTGGGG GACATCCTGG GCCCCTACGC AGACAGCGCC
TATGTGGAGA AGCTCATAAA GGAGGAGAAG GTGGTTGTCA CAGACGTGTC GTACCTGCGC
GGCAGGACCT TCGACGACAG CGTAATCTTC CTCGACGACG CGCAAAACGT GCAGCCGGAG
AGCGCCGCGG AGATCTTGAT AAGGCTTGGG AGAGGCAGCC GCCTCATTGT GGCCGGCGAC
CCCATTTTCC AAAAGCCCGT GGGCGTCGAG AGAGATGGGG CAACTCTTCT CAGAGAGGCG
TTGCTGGGGG AGGAGAAGGC CGAGGTGGTG GACCTCGGCG TGAAGGACAT CGTGAGGCCC
GGCGCGAGGC GGGGGATTAG GCTTGCGCTC GAGCTGAGGA TGCGCAAGAG GACGCTTTCA
GACGCCGAGC GTTACATATA CGAGACTGCG CGCATCTTTG CGCCAGATGC CGACATAATA
ACCGCCGTGG AGTTTCGCGC AGATAAAGAC GCGCTGGGGA TAAAGAGTGA AAATGTGCCA
GACGCCCTCC TAGTCGTCAA AGAGGGGCAA CTGGGCAGAG TGGTGGGCAA GGGCGGAGAG
CGGATTAAGA CCATTGAGGG GGAGGCGGGG GCGCGGCTGA GGGTGTTGGA AATGACCCTG
GACTTTAAAC AGTGGATTAG GGCGCTCCAT CCCATCGGCT GGATTCAGAA GCACATCGTC
GATGCAGACT TCGCAGGCCC CGAGCTGCTC GTGCAAGTAA AGAGGAGCGA GTTCGGCGCC
TTTATAGGGC AGAGGGGCGC CTACATAAGG CTAATAGACA GAGTGATGAG GAGGCTTTTG
GGCATCGGCG TAAGGGCAGT TGAGGCGGAG TAA
 
Protein sequence
MLDKLKPMTV GQERAVNVLR DPENELVGLF GPTGTGKSLL SIAYGIWAVE NGKAKRFIIA 
RPIVDVSTGE TLTPERLGDM YYRIASAYLG DILGPYADSA YVEKLIKEEK VVVTDVSYLR
GRTFDDSVIF LDDAQNVQPE SAAEILIRLG RGSRLIVAGD PIFQKPVGVE RDGATLLREA
LLGEEKAEVV DLGVKDIVRP GARRGIRLAL ELRMRKRTLS DAERYIYETA RIFAPDADII
TAVEFRADKD ALGIKSENVP DALLVVKEGQ LGRVVGKGGE RIKTIEGEAG ARLRVLEMTL
DFKQWIRALH PIGWIQKHIV DADFAGPELL VQVKRSEFGA FIGQRGAYIR LIDRVMRRLL
GIGVRAVEAE