| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0872 |
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| Symbol | |
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| ID | 4908327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 831391 |
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| End bp | 832593 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124621 |
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| Product | amidase |
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| Protein accession | YP_001055764 |
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| Protein GI | 126459486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGA AGAGGCTTGA GGAGGCCAAA AGGCGCGCCG ACTTGAACTA CTTCGTCTAC
ATAAACGAGA GGGCGGCTGA GGAGCTTGAG GCGCTGGCCA AGGCGGGTAG GTGCGGGAAG
CTGTGCGGCT TGGCGGTGGC TGTTAAGGAC AACATAGAGG TGGCAGGCAT GCCTATTACA
AACGGCGCCC CCTACATGCG CCGGGTTGCA ACAGAGACTG CGCCTGTCGT CGCCGCGTTG
ATGGCGGAGG GCGCGGTGGT GATTGGGAAG ACAAACATGC ACGAGCTGGC CCTCGGGGCC
ACGAACATAA ACCCGCACTT CGGCCCGACT CGAAACCCGC ACGACCCAAC GCGGATAACG
GGAGGGTCGA GCGGCGGCAG CGCGGGGGCC GTGGCCATAG GCGTCGCCGA CGTGGGCCTG
GGGACAGACA CCGGGGGCTC TGTGAGAATA CCCGCGGCCC TCTGCGGCGT CGTCGGCTAC
AAGCCCCCCT ACGGCAAACT GCCGACTAGG GGAGTCCTCC CCCTGGCCCA GAGCCTAGAC
CACGTGGGGC TCATCACCAG AAGCGTAGAC GACTTAGTCC GCGTAATGGC GGCCGTGGGC
TGGCTTGAGA GGGAGCTCCC CGAGGTCAAG AGGTTCCGCT TCGCAGTGTT GATGGGGATT
GCTGAGAACA CTAGGCATGT GGAAAAGGCG TTTTGGAGGG CCGTGGAGGT CCTCGAGAGA
ATAGGCGGGG TGAGAGACGA GGTGTTTGTC GAGGCGCGTA AATACGCGTC GGCTAGGGCG
GCCATCCTCC TCTCTGAGGC CGCCGCCAAC TACTACCACC TGCTGAGGGG CGTGGGGGAC
AAAATGGGGA AAGACGTGGC CACTCTGCTC GCCGCCGGCG CCGCCCTGCC CGCCGTGGCC
TACATCACGG CCAAGCAGGT CAAAGAGGAG GCCACCCAGT TCTTCAACAA GCTATTCAAG
AAATACGACG TGGTGGCCAC GCCCACGACA GCCACTGAGG CAATTCCAAT AGAGGAGGCA
GACAGCGTGG CGGTGAGGCC CAAGCTGCTG GCATACACAG AGCTCTTCAA CCTCACGGGC
CACCCAGCGA TTTCAGTCCC AGCCCCCACC TCCGGCCTCC CCGTGGGCCT ACAGCTCGCG
GCGCGGGACG AGGAGGTGCT ACTCGCCGTC GCTAAAATGT ACGAAAAAGA GGTGGCCGAC
TAG
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| Protein sequence | MIEKRLEEAK RRADLNYFVY INERAAEELE ALAKAGRCGK LCGLAVAVKD NIEVAGMPIT
NGAPYMRRVA TETAPVVAAL MAEGAVVIGK TNMHELALGA TNINPHFGPT RNPHDPTRIT
GGSSGGSAGA VAIGVADVGL GTDTGGSVRI PAALCGVVGY KPPYGKLPTR GVLPLAQSLD
HVGLITRSVD DLVRVMAAVG WLERELPEVK RFRFAVLMGI AENTRHVEKA FWRAVEVLER
IGGVRDEVFV EARKYASARA AILLSEAAAN YYHLLRGVGD KMGKDVATLL AAGAALPAVA
YITAKQVKEE ATQFFNKLFK KYDVVATPTT ATEAIPIEEA DSVAVRPKLL AYTELFNLTG
HPAISVPAPT SGLPVGLQLA ARDEEVLLAV AKMYEKEVAD
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