| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0854 |
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| Symbol | |
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| ID | 4908634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 815909 |
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| End bp | 816322 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124603 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001055746 |
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| Protein GI | 126459468 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.949835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGACGTCG CCGAGTTTAA GAGGTGGATG TTCATGGCGG AACGCACGTT GGAGTCCGCC
ATTAGGGACA TGGAGGGCGG CGACTATAAC TGGGCTTGTT TTAAGGCGCA CCAGGCCGGG
GAGTTCGCCG TTAAGGCCGT CCTGTACGGC ATAGGGAAGC CAGCGAGAGG CCATGCTATT
ACTCGGCTTC TGAGGGAGCT CACTGCGTTT GTCCCCGTGG GAGGGGATGC GTTCGAGGAC
GCGGCGCTTT TAGACAAATT CTACGTGCCC ACTAGGTATG TGGATGCGTG GAGCGAGGGC
GTGCCGTATG AGTATTACAC GAGGCGCGAC GCCGAGTTAG CAATAGAGGC TGCGAGGAGG
ATTATTGAGT TTGCGAAGGG ACTATGGAGG TCGTTAGGTG GAGAGAAGAG CTAA
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| Protein sequence | MDVAEFKRWM FMAERTLESA IRDMEGGDYN WACFKAHQAG EFAVKAVLYG IGKPARGHAI
TRLLRELTAF VPVGGDAFED AALLDKFYVP TRYVDAWSEG VPYEYYTRRD AELAIEAARR
IIEFAKGLWR SLGGEKS
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