| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0847 |
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| Symbol | |
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| ID | 4908742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 807810 |
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| End bp | 808685 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124596 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001055739 |
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| Protein GI | 126459461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.658608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAC TCCCTTTTTT CCTCTCTGGG ATTATCATCG GCTCTATCTA CGGCTTGACT
ACCCTCGGGC TTAGCCTCAT CTTTGGCGTG TTGAGAGTGG CCAACGTGGC GCATGGCTCC
TTCATAATGA TAGGCGCCTA CACGGCCTTT TTCGCGTTTA CGCTGTGGGG CATCGTGCCC
TTCTTGTCCG CGGCCTTGGG CTTTGGGCTT GGCGCATTGA TGGGGTACCT TGTCTACTTA
GGCGTTATTA AGCCGCTGAG GAAGATGGGG GAGTTGCATA CGCTGGTGGC GCTGTTTGCG
CTCGGGATGT TCATAGCCGA GGTGGCCCGC GTGTTGTGGG GCCCCGACTT CGTGGGATAT
AGGTGGTCTA TCGGCAGCTT CTCAGTCGCC GGCCTCGAGG TAGACTACGG CAAGGCCCTG
GGCGCAGTTT TTGCGCTCGT AGTGGCCTTG GCAATAGACT TTATGTTGAA GAAGACCTAC
CTGGGCCGCG CCGTTAGGGC AGTGGTGCAG GACCCAGTGG GCGCACAAGT AGTGGGAGTG
AACGTTGATA GGGTGTACGC CTTCGCCGCG GCCTTGGGCA TCGCCATAAC TACCATGGGC
GGTGTACTTC TAACTCTCTT CATTCCCGTT GGCATAAATC CGTACATGGG AGGGCCCTAC
ACGCTGATTG GGTTTGTAAT TGCCGTACTG GGCGGCCTGG GCTCTGTGCT GGGCGCCTAC
GTCGCTGGGC TAATCTTCGG AATAATAGAG TCTGTGGGGT TCTACGCCTT TTCATACCTT
GGCTTCGCCG AGCCTTCGCA AATGGCGCTT TTCACGGCGT TTGTCCTCCT GCTAGTAATA
CTGCTGTTTA AGCCAACTGG ACTGTTGAAG CTATGA
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| Protein sequence | MDVLPFFLSG IIIGSIYGLT TLGLSLIFGV LRVANVAHGS FIMIGAYTAF FAFTLWGIVP
FLSAALGFGL GALMGYLVYL GVIKPLRKMG ELHTLVALFA LGMFIAEVAR VLWGPDFVGY
RWSIGSFSVA GLEVDYGKAL GAVFALVVAL AIDFMLKKTY LGRAVRAVVQ DPVGAQVVGV
NVDRVYAFAA ALGIAITTMG GVLLTLFIPV GINPYMGGPY TLIGFVIAVL GGLGSVLGAY
VAGLIFGIIE SVGFYAFSYL GFAEPSQMAL FTAFVLLLVI LLFKPTGLLK L
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