Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0839 |
Symbol | |
ID | 4908840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 798593 |
End bp | 800326 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640124588 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001055731 |
Protein GI | 126459453 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAAGG AAGTATTTGA AAAATATATT GCAACGAGGA TATGGGCTAA GAACTACGAC GAGGGGGTCC CCCCCGAGGT TCAAATTAAG CCAGAGCCCC TCTTCTCCTA CTTAGACAGA CAAGCCGCAG AGAGGGGGAG CGCAACGGCG TATGTGTACT TCGGCAACAA GATAAGCTTC AAGACGGTGG GAGACCACAG CGATAGGGTG GCAGCGGCGC TCAAGGAGTG GGGGCTAGGC AAAGGTGACG TCGTTGCGCT ATATTTGCCT AATACGCCTG CCTTTCCGAT TATTTACTAC GGCGCCTTGA AAATAGGCGC AGTGGTAAGC CCCATGAACC CCATGTATAC CCCAAGAGAG GTGGCGTACC AAGCCAAAGA CGCTGGGGCC AGAGTCATCT TCGTGGCCGA CGTGTTGTAC AAAAACGTGG AAGAGGCCGA CAAGATGCAC AAGTTCGACC GCGTGGTGGT AGTAGAAGTG GCCGAGTACA TGCCGGCCTT TATCAAGCCG CTAGCAAAAA GGCGGCTAAA GCCCCCAAAA ATCCCCTATG GGGGACGCAT CGTGTCCTAT AAGTCTCTGC TATCCCACAA AGCCACGTCG TACAGAGCGG CTGTGGACCC CAGGGAGGAC TTAGCCGCGC TCATGTACAC CGGCGGCACC ACCGGCGTCC CCAAAGGCGC CGAAATAACC CACGGCAACA TATCGTCCAA TCTACAACAA CTTAAGCCGC TCTACGAGGT TGTAAAGAGG AGAAGAGGAG AACAACAATT GGTTATGATG GGCGTACTGC CTTGGTACCA CATATACGGC CAAGTCACAG TCATGCACTA CGGCATATTT GACGGCGCCA CAGTGGTAGT AGTACCAAGG CCGGACATAG AACAAATTAT GAAGTTGATA CAAAAGTACA AGGCACATGT GCTCCACGGC GTACCCACCC TATATAATAT GATAATAAAT CACCCAAAGG CGAGACAGTA CAAACTGTCG AGCCTCGCCT TCTGCATATC TGGGGCCGCG CCTCTCCCCG TGGAGGTGGC TAAGAAGTTT GAACAGTTAA CAGGCGCAGT GCTGAGGGAG GGGTACGGCC TTACTGAAAC AGCGGTTGTT ACACACGTCA ATCCTCTATA TGGCAAAGCC AAGGCGGGGT CCATTGGACT CCCCATACCT TCTACCTACG CCGCTGTGGC AGACCCCGAC AAGCCCATCC TCCTGCCCCC AGGCCAAGTG GGAGAAATCG TCATATCGGG TCCCCAGGTG TTCAAGGGGT ATCATAATAG GCCTGAGGAA AACGCCCAAG CCTTCTTTGA ATGTTGCGGC TTGAGGTGGT TTAGGACAGG CGACATGGGG TACATGGACG AGGAGGGGTA CTTCTACATT GTGGACAGGA AGAAGGACAT GATTAAGTAC AAGGGCTACT CTGTGTTCAG CAGAGAGATA GAGGAGGTGC TTTATCAACA CCCATGTGTG AAAGAGGCGG CGGTAATAGG CGTGCCGCAT CCAGAGGCAG GCGAGATACC AAAGGCGTTT ATAGTCCTAA GAGAGGAGTG CAAGGGCAAG GTAACGCCTG AGGACATAAT TAAGTGGACA GAGGACAAGC TCGCCCATTA CAAGAGGCCG CGCGCCGTTG AGTTCAGAGA CGAGTTGCCT AAATCCGCCG TGGGCAAAAT CCTAAAAAGA GAGCTGAGGG CCGAGGAGCT ACGCAAGCTA CAGGAAAGCG CGGCAAAGGC TTAA
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Protein sequence | MTKEVFEKYI ATRIWAKNYD EGVPPEVQIK PEPLFSYLDR QAAERGSATA YVYFGNKISF KTVGDHSDRV AAALKEWGLG KGDVVALYLP NTPAFPIIYY GALKIGAVVS PMNPMYTPRE VAYQAKDAGA RVIFVADVLY KNVEEADKMH KFDRVVVVEV AEYMPAFIKP LAKRRLKPPK IPYGGRIVSY KSLLSHKATS YRAAVDPRED LAALMYTGGT TGVPKGAEIT HGNISSNLQQ LKPLYEVVKR RRGEQQLVMM GVLPWYHIYG QVTVMHYGIF DGATVVVVPR PDIEQIMKLI QKYKAHVLHG VPTLYNMIIN HPKARQYKLS SLAFCISGAA PLPVEVAKKF EQLTGAVLRE GYGLTETAVV THVNPLYGKA KAGSIGLPIP STYAAVADPD KPILLPPGQV GEIVISGPQV FKGYHNRPEE NAQAFFECCG LRWFRTGDMG YMDEEGYFYI VDRKKDMIKY KGYSVFSREI EEVLYQHPCV KEAAVIGVPH PEAGEIPKAF IVLREECKGK VTPEDIIKWT EDKLAHYKRP RAVEFRDELP KSAVGKILKR ELRAEELRKL QESAAKA
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