Gene Pcal_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0837 
Symbol 
ID4908887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp796032 
End bp797204 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content56% 
IMG OID640124586 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001055729 
Protein GI126459451 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG TTGCAGTCGT TGGCGTAGGA GTTAGTAAAT TTGGCAATAG GACAGACGTC 
TCTCTGCAAG AGCTTGCCTG GGAGTCTGTG AAAGAGGCTT TAGACGACGC GAGGCTGGGT
CCCGAGGACG TTGAAGCATT TGTTGTGGGG AACGTCGGCG GCTGGTCCTC CGAGGCCCTG
CCTGCGGTTG TGGTGGGAGA GTACTGCGGC TTGGCGCCTA GGAGTGGGAT AAGAGTCGAG
GCGGCGTGTG CCACGGGCTC CGCCGCCGTG AGAACTGCGT ATCACATGGT GGCAAGCGGC
GAGGTGGATA TAGCGATGGC TATCGGCGTT GAGAAAATGA ACGAGTCCCC CACTCCAACC
GTCGTAGAGT TCATAGGGAG GGCGGGGAAC TACTTCTGGG AGTTTGAAAA CTTCGGTCTA
ACCTTCCCCG GCTATTATGC GCTCTACGCC ACGGCCTATA TGAACCGCTA CGGCGCCACA
GAGGAGGACT TGTGCAAAGT CGCCGTAAAG AACCACTACT ACGGCTCGTT GAACCCCAAG
GCGCAGTTTC AGAAGGCTAT AACAGTCGAG GAGTGTCTAA ACTCCCGCTA TGTGGCTTGG
CCGCTTAAGC TGTACGACAG TAGCCCAATT ACAGACGGCT CGGCGGCGGT GATACTCGCC
AGCGAGGAGG TGGCGAGAAA AATCACTGAC ACACCTGTGT GGATAAAGGC CATCGGCTAT
GCCAATGGCA CGGCCAATTT GAGCAAAAGA GTGGACTTTG TGGGCTTAGA GGCGGCGCAA
ATCGCCGCGC AGATGGCCTA TAAGAAGGCT GGGATAGACC CCCAGGAGCC TGTAAAATAC
CTCGACGTGG CCGAGGTCCA CGACTGTTTT ACAATAGCAG AGATTATGGC GTATGAGGAT
TTGGGGTTTG CGAAGCGGGG GGAGGGATAT AAGCTGATTA GAGAGGGGCA GACCTACATA
GGCGGGTTAA TACCGGTGAA TTTGGACGGG GGGCTGAAGG CCAAGGGGCA CCCCATTGGC
GCCACTGGCG TATCAATGAT AGCCGAGTTG ACGAAGCAGC TTAGGCAAGA GGTCGAGAAA
GGGAGGCAGG CGCCCATAAG AAAAGGCATG GCACTGGCGC ACAACATCGG GGGGACGGGA
CACTACGCCT TTGTGACAAT ACTAAGTCTG TAA
 
Protein sequence
MRKVAVVGVG VSKFGNRTDV SLQELAWESV KEALDDARLG PEDVEAFVVG NVGGWSSEAL 
PAVVVGEYCG LAPRSGIRVE AACATGSAAV RTAYHMVASG EVDIAMAIGV EKMNESPTPT
VVEFIGRAGN YFWEFENFGL TFPGYYALYA TAYMNRYGAT EEDLCKVAVK NHYYGSLNPK
AQFQKAITVE ECLNSRYVAW PLKLYDSSPI TDGSAAVILA SEEVARKITD TPVWIKAIGY
ANGTANLSKR VDFVGLEAAQ IAAQMAYKKA GIDPQEPVKY LDVAEVHDCF TIAEIMAYED
LGFAKRGEGY KLIREGQTYI GGLIPVNLDG GLKAKGHPIG ATGVSMIAEL TKQLRQEVEK
GRQAPIRKGM ALAHNIGGTG HYAFVTILSL