| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0834 |
|---|
| Symbol | |
|---|
| ID | 4908932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 794203 |
|---|
| End bp | 795030 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640124583 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055726 |
|---|
| Protein GI | 126459448 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCT TAGGGGTTCT CTCGGCCCTA GCCGCGGCCA CCATCTGGGG GCTAGTGATA
TTCCTGTACA AGCGACACAT GGCGGATTTA GACCCCGTGT CTGTAAACTT CTCCAGACTG
GCCTACGTGG CTCTCTCCAT GTGGCCAGCG GCCCTGTTCA CAGCCCCCTC GCCGGGCATT
CTAGCCGCAG TTTTCAGCGG GTTGATAACT CTCGTAGTCG GCGACAGTCT CTATTTCTAT
GCCATTTCCA AGGTCGGGGG GTCTATAGCG GCCCCACTGG CGTACACCTA CATAATAATT
GCCCAGTACT TTGCCCTACT CCTAGGCGAG TCTGTGTCCC ACATGCTCTT CCTCTCCTCA
ATCTTAATCG TGGTGGGGGT CGCGCTTTTG ACAAAAGGCG GCGAGGCAAG GCTGAGCGTG
CCCGGCCTCC TGGCGGCGGC GGGGACGGCC CTGACGTGGA GCGCGGGCAT GTCGGCCATA
AAGCTCGCCT CTCTAGGAGG CGTACACCCA GTCGCCATAG CCTACCTAAG GGCAACCTCC
GCCGCAGCCG CGCTGGGGCT TTACGGCCTC TTAACGCGGA GAATAAGAGT GGTAAAGTCC
CTCCCCTTCG CGGCGGCCTC TGTGCTAGAC CTAGGAGTAG GCTCGGCGTT ATTCGCCCTC
TCTGTGGAAA GGACAGGCCT CTCGCTGACA ACAATAGTCG TCTCTCTCTC GCCCCTAATA
GCACAGCTAT ACGCAAAAGC CACCGGCTTA GAAAGCCTCA CCGCCAAGCA AATATTAGGC
GGCGTAGCAG TTTTTACGGC GGTTGCAACA GCGGTGGCAA CGGGATAG
|
|---|
| Protein sequence | MDLLGVLSAL AAATIWGLVI FLYKRHMADL DPVSVNFSRL AYVALSMWPA ALFTAPSPGI
LAAVFSGLIT LVVGDSLYFY AISKVGGSIA APLAYTYIII AQYFALLLGE SVSHMLFLSS
ILIVVGVALL TKGGEARLSV PGLLAAAGTA LTWSAGMSAI KLASLGGVHP VAIAYLRATS
AAAALGLYGL LTRRIRVVKS LPFAAASVLD LGVGSALFAL SVERTGLSLT TIVVSLSPLI
AQLYAKATGL ESLTAKQILG GVAVFTAVAT AVATG
|
|---|
| |