Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0833 |
Symbol | |
ID | 4908942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 793553 |
End bp | 794194 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640124582 |
Product | hypothetical protein |
Protein accession | YP_001055725 |
Protein GI | 126459447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCAT TGCTCAATCT CACTGCTCCG CCGGTTTTGC TCTTGTTTTT GCCGGCGGCT TTGGTTGGCA ATTATACGCT TCCCGTCCCT CCGGCGTCTG AGGTGGCGGC TTTTTCGCTC GACGGGGCTC CTCTGCCCAC CTGGGTCTTG AACGGGACGC TCTACGTGTT GCAAGGCGGC GAGCCGGCGG TGGCCGTTTA TGTGCCGAGG TTTTTCAACT CCAGCGGAGT CTACAGCGTG ACCGTAGAAG GCCCCTTTGT GGCACAGGCG CCGCCCGGGG TAATGGTGAT AGAGGCTAGG CCACAGCCGG CGAGGGTGGC TGTGAACAAG ACGGGGCTAT ACCTATACTT TGACACAGGA GCCACAATTG TCTACCAAGC CTTCACCATA CAGCCGACTC CGACGGCAAG CCCACCTCAA ACTACGCAGA CTACGACGAT AAGCCCACCT CCAGCGACGA CCAGTACGCC GCCTCATGCC ACAACCACCA CGACGCCCTC GACTACAACA ACGCCTAGTC CAACCTCCAC CGCTACGCCA ACCCCTACAG CGCCAGTTGA GTGGTTGCTT GCAATCGTTT TAGTGATCGT CGTAGTGGTG ATAGTGGCAA TAGTCAGAAG TAGAAAGAGG TGGCGTTTTT AG
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Protein sequence | MSALLNLTAP PVLLLFLPAA LVGNYTLPVP PASEVAAFSL DGAPLPTWVL NGTLYVLQGG EPAVAVYVPR FFNSSGVYSV TVEGPFVAQA PPGVMVIEAR PQPARVAVNK TGLYLYFDTG ATIVYQAFTI QPTPTASPPQ TTQTTTISPP PATTSTPPHA TTTTTPSTTT TPSPTSTATP TPTAPVEWLL AIVLVIVVVV IVAIVRSRKR WRF
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