Gene Pcal_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0833 
Symbol 
ID4908942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp793553 
End bp794194 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID640124582 
Producthypothetical protein 
Protein accessionYP_001055725 
Protein GI126459447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAT TGCTCAATCT CACTGCTCCG CCGGTTTTGC TCTTGTTTTT GCCGGCGGCT 
TTGGTTGGCA ATTATACGCT TCCCGTCCCT CCGGCGTCTG AGGTGGCGGC TTTTTCGCTC 
GACGGGGCTC CTCTGCCCAC CTGGGTCTTG AACGGGACGC TCTACGTGTT GCAAGGCGGC 
GAGCCGGCGG TGGCCGTTTA TGTGCCGAGG TTTTTCAACT CCAGCGGAGT CTACAGCGTG 
ACCGTAGAAG GCCCCTTTGT GGCACAGGCG CCGCCCGGGG TAATGGTGAT AGAGGCTAGG 
CCACAGCCGG CGAGGGTGGC TGTGAACAAG ACGGGGCTAT ACCTATACTT TGACACAGGA 
GCCACAATTG TCTACCAAGC CTTCACCATA CAGCCGACTC CGACGGCAAG CCCACCTCAA 
ACTACGCAGA CTACGACGAT AAGCCCACCT CCAGCGACGA CCAGTACGCC GCCTCATGCC 
ACAACCACCA CGACGCCCTC GACTACAACA ACGCCTAGTC CAACCTCCAC CGCTACGCCA 
ACCCCTACAG CGCCAGTTGA GTGGTTGCTT GCAATCGTTT TAGTGATCGT CGTAGTGGTG 
ATAGTGGCAA TAGTCAGAAG TAGAAAGAGG TGGCGTTTTT AG
 
Protein sequence
MSALLNLTAP PVLLLFLPAA LVGNYTLPVP PASEVAAFSL DGAPLPTWVL NGTLYVLQGG 
EPAVAVYVPR FFNSSGVYSV TVEGPFVAQA PPGVMVIEAR PQPARVAVNK TGLYLYFDTG 
ATIVYQAFTI QPTPTASPPQ TTQTTTISPP PATTSTPPHA TTTTTPSTTT TPSPTSTATP 
TPTAPVEWLL AIVLVIVVVV IVAIVRSRKR WRF