Gene Pcal_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0832 
Symbol 
ID4908946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp792615 
End bp793517 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content51% 
IMG OID640124581 
Producthypothetical protein 
Protein accessionYP_001055724 
Protein GI126459446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACT ACAAACTACT ACTGGTACTG GCCGTGGCGC TAGTGGCGTT CGCCAGCGCT 
ACTAATACGA ATACCACAAG CTTTGACTTA TGGCTCAAGT GCAAGGCCAT TGAGCTCTAC
TTAAACGTCA CGGGGGCCAA TGCCACAATT CCATGCGACC AAGCACTAAA ACAGGTAAGA
ACAGTTAATT TTACAAAGGC GCCATTGCCA ATGATAGGCG TTGGAGAATT GAGAAAGTTA
AATGTGTCTA ACCCAGGGCA AGTCTTCAAC GAACTCAAGG AGATTAGGAG AAAGGCCTTG
GCCAATCTGA CTGCCCACGT GAAGAAAGTA CAGCACATGA CTTTGAGAGA GTTAAACACC
ACCGGGCTAG AGGAGGCCTA CAATGCCACA GGTCGCGCAG TAGAGACGTT AGGCCGCGTG
GCAACACTCT TGAGGAAAGT CAACGCCTCT CCCGTGGCCG TGGTTGCTGT AGAGAGAGAC
TTGGAGTGGA TAAATGCCAC TCGCCGACTT CTATGGACTT TGCGGCAAGG CGATAGGTGG
ATTATAACAG CGGTTGGCAA TGCCTCCGAC GCGGAGATTG AGGAGGCGTT GAAGAGAGTG
GAGGAGCTTA GGAGAGAGTG GGCCGCCTTG TGGGATAGGC TCGAAGAGTA CAAACTGGCT
TGGCGAGAGT TAGTCCGAAA GCGGGCGGAG AGGTGGCTAA ATGAGACAAA CTCAACCCTC
TGGGACATAT GGATAGCGGC AAGATTAAAC CGCGGCGAAG TGGTAAAGTA CATCAGAGCT
GAAAACTTGA CGGCGATAAG AGAAATAGCC CAGAAGACAA AAAGGGAGCG CCCAGACATC
GTAGAAAGAG AAATTAGGGA AGCAGTCGAA AGAGGTAAAG GACAAGCTGG TCGCGGCCGC
TAA
 
Protein sequence
MPNYKLLLVL AVALVAFASA TNTNTTSFDL WLKCKAIELY LNVTGANATI PCDQALKQVR 
TVNFTKAPLP MIGVGELRKL NVSNPGQVFN ELKEIRRKAL ANLTAHVKKV QHMTLRELNT
TGLEEAYNAT GRAVETLGRV ATLLRKVNAS PVAVVAVERD LEWINATRRL LWTLRQGDRW
IITAVGNASD AEIEEALKRV EELRREWAAL WDRLEEYKLA WRELVRKRAE RWLNETNSTL
WDIWIAARLN RGEVVKYIRA ENLTAIREIA QKTKRERPDI VEREIREAVE RGKGQAGRGR