Gene Pcal_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0821 
Symbol 
ID4909251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp781996 
End bp782451 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content56% 
IMG OID640124570 
Product30S ribosomal protein S6e 
Protein accessionYP_001055713 
Protein GI126459435 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACGT TTAAGCTGGT GCTATCAGAC CCACTCTCGG GCAAGGCTAG GCAGTTCGAG 
ATAAAAGATC CCTTGGCACA GCGATTTGTG GGTCTTAGAA TAGGCGAGGA GATAGACGGC
ACCGTGTTGA AAGAGCTGAT AGAGCTTCCA AAGGGCGTCA AAATAAGGAT AACTGGCGGA
AGCGGCGTCG AAGGCGCGCC AATGCACCCA GGCGTCCCAG GCCCCGTCAA GAGGTACATC
CTGGCCGACG GGCCCCCGGG CTATAGGCCG CGGAAGAGGG GTATGAGAAA GAAGAAGCTG
GTGAGAGGCG ACACAATAAC CGACTCAATT GTGCAAATAA ACGCAGTCTT AGTCTATCCA
GAGGGCTACA GCGGACCTCC GGCAATACCT CTTGGAGCTA AGGAGTTGGA AAAACTGAAG
GGCGGAAAAA CAGAGGAGGC GGCCGCCTCC CAGTAG
 
Protein sequence
MPTFKLVLSD PLSGKARQFE IKDPLAQRFV GLRIGEEIDG TVLKELIELP KGVKIRITGG 
SGVEGAPMHP GVPGPVKRYI LADGPPGYRP RKRGMRKKKL VRGDTITDSI VQINAVLVYP
EGYSGPPAIP LGAKELEKLK GGKTEEAAAS Q