Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0821 |
Symbol | |
ID | 4909251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 781996 |
End bp | 782451 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640124570 |
Product | 30S ribosomal protein S6e |
Protein accession | YP_001055713 |
Protein GI | 126459435 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2125] Ribosomal protein S6E (S10) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACGT TTAAGCTGGT GCTATCAGAC CCACTCTCGG GCAAGGCTAG GCAGTTCGAG ATAAAAGATC CCTTGGCACA GCGATTTGTG GGTCTTAGAA TAGGCGAGGA GATAGACGGC ACCGTGTTGA AAGAGCTGAT AGAGCTTCCA AAGGGCGTCA AAATAAGGAT AACTGGCGGA AGCGGCGTCG AAGGCGCGCC AATGCACCCA GGCGTCCCAG GCCCCGTCAA GAGGTACATC CTGGCCGACG GGCCCCCGGG CTATAGGCCG CGGAAGAGGG GTATGAGAAA GAAGAAGCTG GTGAGAGGCG ACACAATAAC CGACTCAATT GTGCAAATAA ACGCAGTCTT AGTCTATCCA GAGGGCTACA GCGGACCTCC GGCAATACCT CTTGGAGCTA AGGAGTTGGA AAAACTGAAG GGCGGAAAAA CAGAGGAGGC GGCCGCCTCC CAGTAG
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Protein sequence | MPTFKLVLSD PLSGKARQFE IKDPLAQRFV GLRIGEEIDG TVLKELIELP KGVKIRITGG SGVEGAPMHP GVPGPVKRYI LADGPPGYRP RKRGMRKKKL VRGDTITDSI VQINAVLVYP EGYSGPPAIP LGAKELEKLK GGKTEEAAAS Q
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