Gene Pcal_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0792 
Symbol 
ID4909833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp759144 
End bp759617 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID640124541 
ProductPadR family transcriptional regulator 
Protein accessionYP_001055684 
Protein GI126459406 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC GTAGGCGCGG CCTCTACAAG GGGGTAGTGC TCTACATGCT TAAGTCAAGG 
CCTCTGAGCG GCTACGAGAT TCTCAAGGAG TTGGCCAAGC TTACTGGCGG TCGCTTCACT
CCGTCGCCCG GCTCTCTCTA CCCACTGCTC TCGTATTTAG AGGCCGAGGG GCTTGTGGAG
GCCAGGGAGG TGTATGTGGG GAGGCGTAGG AAGAAGGTAT ACGCCTTGAC GCAGGCGGGG
GAGGCATATC TAAAGGAGCT TGAGGAAAAT CCAGAGTTTG TCCAACTATT GCAGGAGCTT
GAGAGGGGCC CCGGCGGGGC GGACTTCCTC GCCGCTATTA GAGACGAGCT GGCGTACATA
GAGGAGGTCT TCGACGAAGT GGAAGACGGA AACGCCGACA CTCTGAAAGA GATATACGAA
ATACTTAAGC GGTTGGAGGC AAAGGTATTA CAGAGGCTTT CTAAATCCAG TTAG
 
Protein sequence
MFKRRRGLYK GVVLYMLKSR PLSGYEILKE LAKLTGGRFT PSPGSLYPLL SYLEAEGLVE 
AREVYVGRRR KKVYALTQAG EAYLKELEEN PEFVQLLQEL ERGPGGADFL AAIRDELAYI
EEVFDEVEDG NADTLKEIYE ILKRLEAKVL QRLSKSS