| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0788 |
|---|
| Symbol | |
|---|
| ID | 4908202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 755093 |
|---|
| End bp | 755440 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640124537 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055680 |
|---|
| Protein GI | 126459402 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCG TACATCCCAA GTGGCTTGAA AGACATGTGA GACACATGGA AGAGGCGCTC
AGGGGGGCTG AAAGGGGAGA TGCCCAGTGG GCTTGCTACA ACGCATACGT GGCAGTCAGA
GCGCTGTTAA TGGGCCTACA GGGCTATGAC CCCTACGCCC CACTTCCCCT ACTAACCGCG
TTGCCCTCTC TCGTCAAGAA AGTTGTGGGC AACCCCGCTG AGGGTGTCTT AGAATGTGCC
TACTGCCTAG AGCGGAGACT TCACGACCCC GATGCGGTTA AGTGCGTCAA ATGTGCAGAC
GTAATTTCGC AGGCCCTATT CCCCGCCTCT ACTCAGTGGG CAAGATAG
|
|---|
| Protein sequence | MPPVHPKWLE RHVRHMEEAL RGAERGDAQW ACYNAYVAVR ALLMGLQGYD PYAPLPLLTA
LPSLVKKVVG NPAEGVLECA YCLERRLHDP DAVKCVKCAD VISQALFPAS TQWAR
|
|---|
| |