Gene Pcal_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0775 
Symbol 
ID4909778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp744529 
End bp745152 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID640124524 
Productpeptidase M50 
Protein accessionYP_001055667 
Protein GI126459389 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATACTC CAGAGGAGGT TAAAAAGAGG GAGCTGGTGG ACATTGTAGT TGCTTTGTTG 
ACGCTGGCAC TCGGATTTTC CATTGCCATG GCCAACGTAA ATCTTGCACA TATTGAAAAT 
CTTGCACACA TTCCTCTTTT CTTCCCAATA GCGCTTTTCG TTCTGCTATT CGCCTTCATT 
GGACACGAAC TGGCCCATAG GCAAGTCGCC AGGAGGCTCG GCTACTTTGC CTATTTTCAG 
GCCGACTACC GGCTCTTACC CCTGGCCGTA ATTTTGCCGC TTTTCGTGGG CGTGGTGTTC 
GCCGCGCCGG GGGCCGTGGT CATTTCGCCA TTTAGGTTCT ATGGCCGCGG CGACGAGAGG 
CGTGACATAT TTTTCATCTC CGCGGCTGGC CCGTTGACAA ATATAGTGTT TGCAGCTCTG 
GGCCTAGCCG CATATCTGTG GGCTGGGTAC GGGCTACTTC TCGGCTTTGC ATATGTGAAT 
GCGTGGCTTG CTCTTTTTAA CTTGCTTCCA CTGCCGCCGC TTGACGGCGA GAAGATTATA 
AAAACTAATT TGCCCATGTG GCTGTTGTTA ATTATCACGG CCGGCGCTTT GACGTGGCTT 
ACTTTGAGAC GGCTTACATG GTGA
 
Protein sequence
MYTPEEVKKR ELVDIVVALL TLALGFSIAM ANVNLAHIEN LAHIPLFFPI ALFVLLFAFI 
GHELAHRQVA RRLGYFAYFQ ADYRLLPLAV ILPLFVGVVF AAPGAVVISP FRFYGRGDER 
RDIFFISAAG PLTNIVFAAL GLAAYLWAGY GLLLGFAYVN AWLALFNLLP LPPLDGEKII 
KTNLPMWLLL IITAGALTWL TLRRLTW