| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0772 |
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| Symbol | |
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| ID | 4909462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 741408 |
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| End bp | 742277 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124521 |
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| Product | spermine synthase / spermidine synthase |
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| Protein accession | YP_001055664 |
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| Protein GI | 126459386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG TGCCCGGTCC CATAACGCTC ATAGAGCCCC TCAGCGGCAA CACCTCGCTC
TTGATAAAGA TAAACGCAAT ACACTCAGTT AAAAAGTCGC CGTATCAAGA GATCATAATA
GCCGACACTG AGGACTACGG CCGCGTCCTC ATCTTGGACG ACTACATCCA GTCCTCCTAC
GTCGACGAGC AGTACTACCA CGAGTCCCTC GTCCACCCAG CCATGGCCAC GCACCCCAAC
CCACGCGACG TGCTAATACT CGGCGGCGGA GAGGGGGCCA CGCTCAGAGA GGCGTTGAAA
CACGGCACGG TGAAGAGGGC AGTGATGGTG GACATAGACC GAGACGTAGT AGAACTGTCG
CGGGCGTACC TCCCCCAGAT GCACCAAGGC GCCTTCGACG ACCCCCGCGC AAAAGTGGTA
ATACAAGACG GCTTCGTCTA CGTGGAAGAG GCAATCAAGG CGGGCGACAA ATACGACGTG
ATAATAATGG ACTTGACAGA CCCATACAGC TCAGACATCG CAAAACAGCT CTACACCCGG
GAGTTCTTCG CAAAAATTAG GCGGATACTA AACGACGACG GCGTAGTGGT CACACAGGCG
GGAAACAGCT TCTACTTCCC CGCCGAGTAC GACATGGTCC TCGAAGGCGT AAAGGCGAAC
TTCCCCATAG TGGCCGAGTA CGAGGTGTGG ATACCCTCCT TCGGCTACGC CGTCAACTTC
ATACTAGGCT CTTTGAGATA CGACCCACAC GCCCTCACGC CCTCGGAGGT AGACGAGAGG
CTAAGGGCCA GGGGGGTAAA GACCGCGTTC TACACGGGCC GCGTCCACCT AGCCCTTATG
AACATGCCAA TACACAGAAA ACTCAGATGA
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| Protein sequence | MRKVPGPITL IEPLSGNTSL LIKINAIHSV KKSPYQEIII ADTEDYGRVL ILDDYIQSSY
VDEQYYHESL VHPAMATHPN PRDVLILGGG EGATLREALK HGTVKRAVMV DIDRDVVELS
RAYLPQMHQG AFDDPRAKVV IQDGFVYVEE AIKAGDKYDV IIMDLTDPYS SDIAKQLYTR
EFFAKIRRIL NDDGVVVTQA GNSFYFPAEY DMVLEGVKAN FPIVAEYEVW IPSFGYAVNF
ILGSLRYDPH ALTPSEVDER LRARGVKTAF YTGRVHLALM NMPIHRKLR
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