Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0747 |
Symbol | |
ID | 4908847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 704209 |
End bp | 704862 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640124496 |
Product | hypothetical protein |
Protein accession | YP_001055639 |
Protein GI | 126459361 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000125614 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGAGT ACCTTGCATG GGCAGAAAAT TTTGTCAAAG AGAAATATGT AACTAGTAAT GGAAGAAAGT TTTCAACATT ATATAATAAA ATCGTTAACA ATAATAACTG GACTAAACTA ACTGATACTT CAGGTGGGCT ACTCATATTT AGGAAAGGCA TACACAAAAA TTATGGGGTA TTACTAAACA GAGTTGTCGA TGCCCAGTTC CATCAGAGAC TTTACATAGG CTATATAAAA GACGAATTCA GAGGAAGAGT TAGTCCTGAA GTACTATTCG CCGTAGTAAA TTCTGTCATA ACATATATTG GTATGGAGTT AATTGGACAA ACTAGCTTGG GAGAGGGAGT TCTCGACATT AAGACGACCG ACTATGAAAG AATACCGATA ATCAATCCAA TATGGTTAGA AAAACATCTT AGAGAAAACA ATAAGTTTAG TGAATTCCTT GATACTGTCA ATAATATGCT TAGGCTTAGA CCTAAAGATA TAGAGAATGA GGCAGAAAGA CTAGAAAGGT TAGAGATGGA AAAATTTGTG CTAGGATCTC TAGGATTTGG TGAAAACGAG ATAAGGGATC TATATAGAGA ACTTATAAAA CTTGTCCAAT TTAGGACGGA AAGAGCTAGA AATGTAAGAC AAGACTATTC ATGA
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Protein sequence | MREYLAWAEN FVKEKYVTSN GRKFSTLYNK IVNNNNWTKL TDTSGGLLIF RKGIHKNYGV LLNRVVDAQF HQRLYIGYIK DEFRGRVSPE VLFAVVNSVI TYIGMELIGQ TSLGEGVLDI KTTDYERIPI INPIWLEKHL RENNKFSEFL DTVNNMLRLR PKDIENEAER LERLEMEKFV LGSLGFGENE IRDLYRELIK LVQFRTERAR NVRQDYS
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