Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0733 |
Symbol | |
ID | 4908680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 693941 |
End bp | 694576 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640124482 |
Product | hypothetical protein |
Protein accession | YP_001055625 |
Protein GI | 126459347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000017962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGAATA AGACTGGTAT AGGATTGGCG GTAATCGCGT TGGCGCTTGC GGCGTTGGCG GCCGCGGCGT GGTGGGGCTC GTGGAATAGC CCACCTTATG GAGGCATGAT GGGCGGTGGA ATGGGAGGTG GAGGCATGTG GGGCAGGCCG GCCGGCGTCC CAATGGGCAT GTATGGAGTG GGGGGTTGCC CTATGGCGGG GTGGGGCGGC GGATTGTATG TAAATGATAG CAATGTTGTA GAGTATGTAA AACGGGTTAC TGGGTATGAG GTTATTTCTG TGGAGAAGTA CAGCAATGGC TACTACGTAG TTGTGGGTAT CGGCGGCGCC CCTCAGCGCG AGGTTTTGGT GTTCTTCAAC GGCGTTATAC ATCCGGAGCC CCAGTCTATG ATGTGGCTTG GGTCTCCCAT GCGGATCTCT GAGGAGGAGG CTAGGCGTAT TGCGGAGAGC TGGCTAGCCA GCCGCTTCCC AGGCGCCGTG ATTGAGGAGG AGTACACGTT CCCCGGCTAC TACACCTTCC ACTTCGAGGT GAGCGGCGAT ATGCAGATGT TGAGCGTCAA CGGGTACAGC GGCGCGGTGT GGTTCCACAG CTGGCACGGC AAATACCTCG GCGAAGTGTT CCCAGAGGCC CATTAA
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Protein sequence | MVNKTGIGLA VIALALAALA AAAWWGSWNS PPYGGMMGGG MGGGGMWGRP AGVPMGMYGV GGCPMAGWGG GLYVNDSNVV EYVKRVTGYE VISVEKYSNG YYVVVGIGGA PQREVLVFFN GVIHPEPQSM MWLGSPMRIS EEEARRIAES WLASRFPGAV IEEEYTFPGY YTFHFEVSGD MQMLSVNGYS GAVWFHSWHG KYLGEVFPEA H
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