Gene Pcal_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0732 
Symbol 
ID4908648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp693350 
End bp693841 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID640124481 
Producthypothetical protein 
Protein accessionYP_001055624 
Protein GI126459346 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000258314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATTGG CCCCCCTCTT GGCCTTCGCC GCCGTAGCCG CCGTAGTCTT AGACTACCTC 
CATGTCTCCC TCATGTGTCC ACTGTGCCGC TTCCCATCGC CCATGCTCCC AGTATTTTTC
CTCTTAACTC TACTTACCAC CGCCCTGTTA GACGTGTTTT ATACAGGAGG GTTTAAACCA
ACTAGACAGC AGACCCAGGG CCTACCCGCC GCTGTTATAA ACCTCCTCCG AGAGCCCGAC
CGGTCGATAT ATATCAAGGT CTATGAAAAG GGGGGAGAGG TGTCGCTGTC CGAAGTAGCC
AAGGAACTAG GACTTAACAA ACTAAGGGCG TGGAGAGCCG CGCAGAGACT TGCCGAAAAA
GAGCTTGTTT ACCTAGAAAA AAGGTCCGGG AGATTAGTGG TGCGGCTGAG ACCCCTTGAA
AATCTGCCTA TAAAGCCAGA AAAGGGCAAA GACAATAAAC AGCAGAAACA ACACAGCCAA
AGCCAGCCCT AG
 
Protein sequence
MRLAPLLAFA AVAAVVLDYL HVSLMCPLCR FPSPMLPVFF LLTLLTTALL DVFYTGGFKP 
TRQQTQGLPA AVINLLREPD RSIYIKVYEK GGEVSLSEVA KELGLNKLRA WRAAQRLAEK
ELVYLEKRSG RLVVRLRPLE NLPIKPEKGK DNKQQKQHSQ SQP