Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0732 |
Symbol | |
ID | 4908648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 693350 |
End bp | 693841 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640124481 |
Product | hypothetical protein |
Protein accession | YP_001055624 |
Protein GI | 126459346 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000258314 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATTGG CCCCCCTCTT GGCCTTCGCC GCCGTAGCCG CCGTAGTCTT AGACTACCTC CATGTCTCCC TCATGTGTCC ACTGTGCCGC TTCCCATCGC CCATGCTCCC AGTATTTTTC CTCTTAACTC TACTTACCAC CGCCCTGTTA GACGTGTTTT ATACAGGAGG GTTTAAACCA ACTAGACAGC AGACCCAGGG CCTACCCGCC GCTGTTATAA ACCTCCTCCG AGAGCCCGAC CGGTCGATAT ATATCAAGGT CTATGAAAAG GGGGGAGAGG TGTCGCTGTC CGAAGTAGCC AAGGAACTAG GACTTAACAA ACTAAGGGCG TGGAGAGCCG CGCAGAGACT TGCCGAAAAA GAGCTTGTTT ACCTAGAAAA AAGGTCCGGG AGATTAGTGG TGCGGCTGAG ACCCCTTGAA AATCTGCCTA TAAAGCCAGA AAAGGGCAAA GACAATAAAC AGCAGAAACA ACACAGCCAA AGCCAGCCCT AG
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Protein sequence | MRLAPLLAFA AVAAVVLDYL HVSLMCPLCR FPSPMLPVFF LLTLLTTALL DVFYTGGFKP TRQQTQGLPA AVINLLREPD RSIYIKVYEK GGEVSLSEVA KELGLNKLRA WRAAQRLAEK ELVYLEKRSG RLVVRLRPLE NLPIKPEKGK DNKQQKQHSQ SQP
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