| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0718 |
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| Symbol | |
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| ID | 4908388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 678003 |
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| End bp | 681050 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124467 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055610 |
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| Protein GI | 126459332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1483] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000573342 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTTGA GGGAGTTTGT TAGGCGGCTT GATGTTGTGG ATAGGTTTGT GTCTGGTGGT
GTATCTCCTG CGGTTGATGT GAAGGTGGTG TTTGACTGTT TGTTTGGTGG GGGGCGGCCT
GTCGCAGGTC ACGAGGTGTA TTGTTCGAGG GAGGAGTTTT TCTCTGTGAC GTACCCCACG
GCGGGGATGG TTAGGTGGCT GTCTGTGTTG TTTGGGGTTT TGGCTGGGCG GCCTGGGAAG
AACGTCTTTG TGCTTCCCGC CTACCTGGGG GCTGGGAAGT CGCACTTTTT GGCGTTTGTG
CTTCACGTGG CGGCTCTTTA TAGGGAGTGT CGTGGGGTTG GGCAGTGTGT GGTTAAGGAG
CTTAAGAGGT ATGGGATTGA TGTGGAGTTG CCTGACTTGG AGGGGGATTT GAGGGTGGTG
CTTTTCCACG GTGGTTACGC TTCGTCGCCG CCTTGGGGGA GCGGCGTGCC GACGAAGGAT
TTGCTGAGGG GGGAGTTGGT GGGGCGCGGT CCTGTCCTCT ACCTCTTTGA CGAGGCTGGG
ATGTTTGACA ACAGGTTTGG CGCACAGTTT GCGGACTATA TGCAGCTTCT CTCTGAGGTG
TTTGTGGAGG CTGGGCCGGG CAAGGCGTTG GTGGTGTCGT ATAGCTTGGC CAGCGGCCAG
TATTCGCCGC CTAGCTTGGA AAGGCTGAGG AGGGTGGACC CGCTGATTAT TGAGATGGAT
GCTGTGAGGA ACATTGTGCA TATCGTGAGG AGGTGGGCTG GGATTGACAA GGTGCCGCCT
TACCGCGAGT TTAGGGATCT CGTGGGCGTG GTGCCGGAGG ACAAGGTGAA GGAGTTTCAT
GGGAAGGTGG CTGAGACGTA TCCCTTCAAC CCTGTGGCGC TTGAGACGCT CCTCCTGCTC
GCCGAGGAGA GCCTTGTGAA GGCGTCTAGA ATTCAGCTCA CTAGGGGCCT TCTGCAGTCT
GCCTTGAAGG CTTTGAAGAG CGCGGTGGAG AGGGGTGGGG GGCTTGTGGT GCATGGGGAT
CTGCCTGAGC CTGGCGAGGT GGTGGAGCCG CCTCCCGAGT TTAGCAAGTT CTGGAGCTCC
ATCCTTGGTC TGTATAGGAA GGATGAGGAG GCGGCGGGCG ACGACTTTGT CCTCCGCTCG
GTTCTGCGCC ATGTGATTTA CCGTAGCTTT GTGGGGAGGC TCATGCCTAG GAGTGGGATA
TACCCAGATG AGGCCGCGCT TATCTTGGGT AACTACGATG TCGTTCTTGG GGCGCTTCCT
GTGTCTAACG CGGTGAGGAG GCTTGGGGAT TTTAGGGTGC AGAAGACCGC GGGGGGCTAC
GTCTATTTGC CTCTTCCAGA CGAGTACGAG GCTTTGGCAA AGGCCCTGGT GTACGTCTCA
GAGGAGGAGG GGGCTAAGGC TGTCCATGAC GAGGTGGAGC AACTCGTCAA GTCTGTGGCT
AAGAGGTTCA AGCGCGTTGC AGTGCTTGGG TGGAAGGAGG GGAAGGCTGA GGGGGTGTCC
TCTTTTGACG ATGCAAAGAA GGCCGCCGAC TACGTGGGGG AGCGGGACTT CTCGGCGCTT
TTGGTGGACC TCAGGGGGAC GGCGCAGGTG CCTAGGCGTA ACAACCTGTT TGTGGTAAGG
GCGAGGGAGG GGGCTGTGCC TGGGGATGTG AAAGAGTTTT TGGGCAAGGT GGCTGTGCCG
CCTGATAAGC TTTCTGGGGC TTTGTACATG TTGGGCAGGG TGAAGGTGGC CGTTGACAGA
GTGGCGGAGG ACTTGGAGAG CTACTTTCCC GACATTGTGC AAGTGGAGGA TAGAGCTCTC
AGGCAGGCGC TGGAGGATGG GGTGAAGGTG CGTCTTGAGC GTATAAAGGA GGTGGCTAGG
TCGTACATTA GGAGGTATGT GGAGAAGTGG CTGGACGAGG TCCTCCTGGG TAGGCGGATC
TCTGCGTCTG GGGGCTTGGA GTATTTGGCC AAGTACCTTG GCAGTAGCAA GCCCGAGGCT
GTAATAGAGT GGGCGCTTGG GAGGGCGCAA GTCTTTGTGA AAATTGGCGA CTTGTGGGAT
CAGTGGCTTA ACAACGACGA TGCGCCGCCT TACCCGTTGT CGTTTGACGA CTTTGTGGAG
GGGCTTCTTA GGAGGTGTAG AGAGGATTGC AACTGTGTGG TGAGGGAGGG GGGCGAGTAT
CAGTGGATCT CGGAGGGGGG TGGGTGTTTC TACGAGCTGA GGGATCCCAG GAATTCCGAG
GTGGCGCTGG CTTACGTGGA GGGCTCGGTC AACGAGTCTG TTGTAGAGCA GTTTCTTACC
TATTTGGATA GCCGCGGGTC TGTTGAGTTT ACGTATCAGA GGCTAGGCGG TGAAGAGGTG
AGGCGTAGCC TCGCAGACGT TTTGAGGGAG AGAGAGGACT GGATGTATCT AAAGCATGCT
AAGTACCGCA TTGAAAAGCG TAAGAAGAGG CTGGACGTCA AAGTCAACGG TGTGGTTACG
TCTCTGGCTG AGGTGAATCC GGGGGACGAG GTTGTGATAG CTGTGGAGTC TGATGAGAAG
ATTTCCCGCG TCATTTGGGA GTTTGCAGGC GTTCAACACG AGACCACGGT TAACGACGTG
TTTTTCCAGT TTAAAGTACG TGTTGGGGAG GATCCGCAGT ACGTGGTGAA GATTGTTGCA
GAGTTTGCCG ATGGTAGCGT GGTGGAGAGG AGCGTAGTTT TGAATGTGCG TGTGAGAAGG
AGGCGCGAGG TGTCCACGGC GGTGGTGAAT GTGGGCGACG TGGTAGTGGC CGTGTCTGCG
TCGTCTGCGG CTGAGGCTGT CCGACTTCTT GAGAGGTTGA AGGAGGACAT TGTAGAGGTC
GTCGAAGTTA GGGCTATTGA GGCTTCTGAG GATTTGAATC TCAGGCTGGA GTTTAGGGGG
CGTAGGGGCC ATCTGCAGCA GGCTCGTCGG CTTATAAAGG CTGTGGAGCC GGTGACTCAG
AACGTGGGGG TCACTGTCAA GTTTAAGGAG CCTGTAACTG TCGATAAGTC TCTGCTTGAG
AGCTTGGGCA AGGGCGCGCT TCTGTGGACT AAGATTGTGG AGGAATGA
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| Protein sequence | MQLREFVRRL DVVDRFVSGG VSPAVDVKVV FDCLFGGGRP VAGHEVYCSR EEFFSVTYPT
AGMVRWLSVL FGVLAGRPGK NVFVLPAYLG AGKSHFLAFV LHVAALYREC RGVGQCVVKE
LKRYGIDVEL PDLEGDLRVV LFHGGYASSP PWGSGVPTKD LLRGELVGRG PVLYLFDEAG
MFDNRFGAQF ADYMQLLSEV FVEAGPGKAL VVSYSLASGQ YSPPSLERLR RVDPLIIEMD
AVRNIVHIVR RWAGIDKVPP YREFRDLVGV VPEDKVKEFH GKVAETYPFN PVALETLLLL
AEESLVKASR IQLTRGLLQS ALKALKSAVE RGGGLVVHGD LPEPGEVVEP PPEFSKFWSS
ILGLYRKDEE AAGDDFVLRS VLRHVIYRSF VGRLMPRSGI YPDEAALILG NYDVVLGALP
VSNAVRRLGD FRVQKTAGGY VYLPLPDEYE ALAKALVYVS EEEGAKAVHD EVEQLVKSVA
KRFKRVAVLG WKEGKAEGVS SFDDAKKAAD YVGERDFSAL LVDLRGTAQV PRRNNLFVVR
AREGAVPGDV KEFLGKVAVP PDKLSGALYM LGRVKVAVDR VAEDLESYFP DIVQVEDRAL
RQALEDGVKV RLERIKEVAR SYIRRYVEKW LDEVLLGRRI SASGGLEYLA KYLGSSKPEA
VIEWALGRAQ VFVKIGDLWD QWLNNDDAPP YPLSFDDFVE GLLRRCREDC NCVVREGGEY
QWISEGGGCF YELRDPRNSE VALAYVEGSV NESVVEQFLT YLDSRGSVEF TYQRLGGEEV
RRSLADVLRE REDWMYLKHA KYRIEKRKKR LDVKVNGVVT SLAEVNPGDE VVIAVESDEK
ISRVIWEFAG VQHETTVNDV FFQFKVRVGE DPQYVVKIVA EFADGSVVER SVVLNVRVRR
RREVSTAVVN VGDVVVAVSA SSAAEAVRLL ERLKEDIVEV VEVRAIEASE DLNLRLEFRG
RRGHLQQARR LIKAVEPVTQ NVGVTVKFKE PVTVDKSLLE SLGKGALLWT KIVEE
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