Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0694 |
Symbol | |
ID | 4909598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 658135 |
End bp | 658674 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640124443 |
Product | hypothetical protein |
Protein accession | YP_001055586 |
Protein GI | 126459308 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000693034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTTTG TGGTGGGTGG CGTGGTGGTG CGTCTGTTGC AGGGGGATAT TACCGAGGTG GAGGCGGGGG CCATCGTCAA CGCGGCAAAC TCGTACCTAG AGCATGGCGG GGGCGTGGCT GGGGCTATTG TGAGAAAGGG CGGGTGGGTG ATTCAAGAGG AGAGCAGGGA GTGGGTCCGG CGCCACGGCC CAGTGCCCGT GGGCGGGGTG GCGGTGACCT CCGCCGGCCG CCTAAGGGCA AAGTACGTGA TACACGCGGT GGGGCCTAGG TGCGGCGTTG AGCCCATTGA GAAGCTCGGC GAGGCCGTTA AAAACGCCCT CTTGAAGGCC GACGAGCTGG GGGTAGAGAG CGTGGCACTA CCGGCCATCT CCACCGGCAT ATTTGGATGC CCCTACCGCG ACGCGGCACT GCAGACCGCC GCCGCCATTA GAGAGACGGC GCCAAAGCTG AAGTCCGTCA AGCTGATTAT GGTCGTCCTC TACGGCGAAG AGGCCTACCG AGCCTTCGCA GACGTATTTA AAAAAGTGTT AGCGGGCTAG
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Protein sequence | MEFVVGGVVV RLLQGDITEV EAGAIVNAAN SYLEHGGGVA GAIVRKGGWV IQEESREWVR RHGPVPVGGV AVTSAGRLRA KYVIHAVGPR CGVEPIEKLG EAVKNALLKA DELGVESVAL PAISTGIFGC PYRDAALQTA AAIRETAPKL KSVKLIMVVL YGEEAYRAFA DVFKKVLAG
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