| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0666 |
|---|
| Symbol | |
|---|
| ID | 4909882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 628581 |
|---|
| End bp | 628892 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640124415 |
|---|
| Product | pyruvate ferredoxin oxidoreductase, delta subunit |
|---|
| Protein accession | YP_001055558 |
|---|
| Protein GI | 126459280 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
|---|
| TIGRFAM ID | [TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC CAAAGGCGTC TCAACTCCCA ATAGGGACTG CTATTACAGA GCCGGGCTCC
ACTAGGCGCA ATTTGACAGC TGGCTGGAGG ACCTTGAGGC CTGTGATACA CGACGACAGG
TGCATACGGT GCCAGCTCTG CTGGCTCTAC TGCCCCGAGG GCACCATAGT CGAGGTAAAG
GGCGTCTTCA AAGTGGGCAA TAGGACCTAC GACGTTAAGT ACGAGATCAA TTACGACTAC
TGCAAGGGCT GTGGCATATG CGCAAACGAG TGTCCAACAA AGGCAATAGA GATGGTCCCG
GAGACGCCAT GA
|
|---|
| Protein sequence | MSLPKASQLP IGTAITEPGS TRRNLTAGWR TLRPVIHDDR CIRCQLCWLY CPEGTIVEVK
GVFKVGNRTY DVKYEINYDY CKGCGICANE CPTKAIEMVP ETP
|
|---|
| |