Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0653 |
Symbol | |
ID | 4908716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 616118 |
End bp | 617341 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640124402 |
Product | hypothetical protein |
Protein accession | YP_001055545 |
Protein GI | 126459267 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAG AGATGTTAAG GCTGGCGTGG CAGGCGCTGT GGGAGAGGAA GGGCAGAACC ATCGGCGCTA TTGTTGGAAT AGTCATAGCC TTCACGGCGC TTAGCTACGC CCTCTTGACA GGCCAGACGT TCAAGGACTA TACCACACGC TTCTTCACGT CTAACTTCGG CGCTAACACG CTGTTTGTCA CAGGTTCCCA GTTCACCGAC GCCGACGTGG GGGTCCTGGC GGGGATACAG GGAGTAGACG CGGTGGTTCC TCTGGCCTCC ACCAGGGGAG TCGTGAGAGT GCCCGGCAGC AACAGCCCCA TACCCGTCAC CGTCTACGGC GTAAACCCAG CCGACCTCCA GCGCGTGCTT CCCTCCACCG CGCTCTACGA CGGGACTATG TTCGTCGGCT CCAACTTCGC CTTGGTGGGC TACTACGTGG CCTTCGACAG ATCCACGGGG CAACAAAGAG TATTGGTGGG GTCTCCGCTT TCTTTAAGCG TTGGGCGGAG GTCTACCACA ATTGCGGCCT CGGGGATCTT GGCCACGGGT AGCGTGGGGT TTTTCGACAC GTCCCGCGGC GTTATTATGG ACCTCTCAAC ATTCCGCCAG CTGACGGGCA TAACTAGCTA CAACGTGGTA ATAGTGCTGG CGAGAGACCC GTCGCTTGTG GACTCCGTGG CCAATGAAAT AAGGGCAAAT TACCCCAATG TGGACGTGAT TTCTCCCCAG GCAATACTCC AGACGGTGAA TACCTACCTC ACAGCGTTTC AACTCTTCAT GGGCATGTTG GCTGGGGTCA GCACTGTTAT CACCGCGCTT TGGCTTTACG ACACCATGAG CATAAACGTG GTGCAGAGGA CTAAGGAGAT CGGCATCATG AGGGCTGTGG GGTTCAAGAG GAGGCACATC ACCCTCATGT TCCTCGGCGA GGCGCTCATA ATAGCCGCAA TAGGCGTGGC CATAGGCGCA ATTCTGCTAA TTCCAGTGTC TCAAGCCGGC CTCTCTCTGC TGTTCGGCAA CGGGGCCACA AGCGCCGGGG GAGGGCAGAG GGGGGCACCA GGCGGGCCTC CGGGCTTCGG CGGAGGCGCA TTCCAGATAA GTTCGCTTGT CTTAGACCCA GTGATTTTGG CCGGGACGGC GGCGTTGGTG GTAGCAGTCA ACCTCCTCGG CGCCTTGGTG CCAGCAGTGC GGGGAAGCAG GATCGACTTA GTGCAGGCGT TGAAATACGA ATGA
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Protein sequence | MYAEMLRLAW QALWERKGRT IGAIVGIVIA FTALSYALLT GQTFKDYTTR FFTSNFGANT LFVTGSQFTD ADVGVLAGIQ GVDAVVPLAS TRGVVRVPGS NSPIPVTVYG VNPADLQRVL PSTALYDGTM FVGSNFALVG YYVAFDRSTG QQRVLVGSPL SLSVGRRSTT IAASGILATG SVGFFDTSRG VIMDLSTFRQ LTGITSYNVV IVLARDPSLV DSVANEIRAN YPNVDVISPQ AILQTVNTYL TAFQLFMGML AGVSTVITAL WLYDTMSINV VQRTKEIGIM RAVGFKRRHI TLMFLGEALI IAAIGVAIGA ILLIPVSQAG LSLLFGNGAT SAGGGQRGAP GGPPGFGGGA FQISSLVLDP VILAGTAALV VAVNLLGALV PAVRGSRIDL VQALKYE
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