| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0653 |
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| Symbol | |
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| ID | 4908716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 616118 |
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| End bp | 617341 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124402 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055545 |
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| Protein GI | 126459267 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCAG AGATGTTAAG GCTGGCGTGG CAGGCGCTGT GGGAGAGGAA GGGCAGAACC
ATCGGCGCTA TTGTTGGAAT AGTCATAGCC TTCACGGCGC TTAGCTACGC CCTCTTGACA
GGCCAGACGT TCAAGGACTA TACCACACGC TTCTTCACGT CTAACTTCGG CGCTAACACG
CTGTTTGTCA CAGGTTCCCA GTTCACCGAC GCCGACGTGG GGGTCCTGGC GGGGATACAG
GGAGTAGACG CGGTGGTTCC TCTGGCCTCC ACCAGGGGAG TCGTGAGAGT GCCCGGCAGC
AACAGCCCCA TACCCGTCAC CGTCTACGGC GTAAACCCAG CCGACCTCCA GCGCGTGCTT
CCCTCCACCG CGCTCTACGA CGGGACTATG TTCGTCGGCT CCAACTTCGC CTTGGTGGGC
TACTACGTGG CCTTCGACAG ATCCACGGGG CAACAAAGAG TATTGGTGGG GTCTCCGCTT
TCTTTAAGCG TTGGGCGGAG GTCTACCACA ATTGCGGCCT CGGGGATCTT GGCCACGGGT
AGCGTGGGGT TTTTCGACAC GTCCCGCGGC GTTATTATGG ACCTCTCAAC ATTCCGCCAG
CTGACGGGCA TAACTAGCTA CAACGTGGTA ATAGTGCTGG CGAGAGACCC GTCGCTTGTG
GACTCCGTGG CCAATGAAAT AAGGGCAAAT TACCCCAATG TGGACGTGAT TTCTCCCCAG
GCAATACTCC AGACGGTGAA TACCTACCTC ACAGCGTTTC AACTCTTCAT GGGCATGTTG
GCTGGGGTCA GCACTGTTAT CACCGCGCTT TGGCTTTACG ACACCATGAG CATAAACGTG
GTGCAGAGGA CTAAGGAGAT CGGCATCATG AGGGCTGTGG GGTTCAAGAG GAGGCACATC
ACCCTCATGT TCCTCGGCGA GGCGCTCATA ATAGCCGCAA TAGGCGTGGC CATAGGCGCA
ATTCTGCTAA TTCCAGTGTC TCAAGCCGGC CTCTCTCTGC TGTTCGGCAA CGGGGCCACA
AGCGCCGGGG GAGGGCAGAG GGGGGCACCA GGCGGGCCTC CGGGCTTCGG CGGAGGCGCA
TTCCAGATAA GTTCGCTTGT CTTAGACCCA GTGATTTTGG CCGGGACGGC GGCGTTGGTG
GTAGCAGTCA ACCTCCTCGG CGCCTTGGTG CCAGCAGTGC GGGGAAGCAG GATCGACTTA
GTGCAGGCGT TGAAATACGA ATGA
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| Protein sequence | MYAEMLRLAW QALWERKGRT IGAIVGIVIA FTALSYALLT GQTFKDYTTR FFTSNFGANT
LFVTGSQFTD ADVGVLAGIQ GVDAVVPLAS TRGVVRVPGS NSPIPVTVYG VNPADLQRVL
PSTALYDGTM FVGSNFALVG YYVAFDRSTG QQRVLVGSPL SLSVGRRSTT IAASGILATG
SVGFFDTSRG VIMDLSTFRQ LTGITSYNVV IVLARDPSLV DSVANEIRAN YPNVDVISPQ
AILQTVNTYL TAFQLFMGML AGVSTVITAL WLYDTMSINV VQRTKEIGIM RAVGFKRRHI
TLMFLGEALI IAAIGVAIGA ILLIPVSQAG LSLLFGNGAT SAGGGQRGAP GGPPGFGGGA
FQISSLVLDP VILAGTAALV VAVNLLGALV PAVRGSRIDL VQALKYE
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