Gene Pcal_0652 details

Gene Information

• Locus tag: Pcal_0652
• ID: 4908688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 615576
• End bp: 616121
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640124401
• Product: hypothetical protein
• Protein accession: YP_001055544
• Protein GI: 126459266

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCTTTA TCCCAGACTT AATCATAGTG GCGCTGGCGT TGTACATAGG CTACCTCACT 
CTTAGGGCGT GGAGGAGCTT GGCCGACTGG AGGCTGTCGC TGTACTCCTT CGGCATGCTG 
ATGCTCGCCG TGTCCCTCGC CGTTGAGGCA GTGGCAGATT TCCTCCTGAG GCTAGCCGCA 
GGCCAGGCCC CGTGGAGATT TGTGATCCAT CAAGCGGCTG GCCTCCGCGC AGTTTTACTT 
CTGCTTCAGC TGGCCGCCCT CGTCCCCTTG GCCATTGCCG TGACGCCCAC CAGCCTCTAC 
GCCGCAGTGC CGTTGCTCCT ATTCCTCCTA CCCGTCAACG TGGCCCTCTC TCTGTACATC 
GCCGTGGTCA CACTGTTGAG GAGCTTGGAG AGGGGGGTAG CCCCGTGGAT TTCCATCGCC 
TTTATCTTCT TCGCGGCGTC TATTATGACG CCGCTCTTCG CCTTCCAAGA CGTGGTGTTT 
AGATCTCTCA CCGCGCTCTT CCTAGCGCTG GGCTTGGCAT ATGGCCAGGA AAAGAAGGAG 
AAGTAG 

 

Protein sequence

MIFIPDLIIV ALALYIGYLT LRAWRSLADW RLSLYSFGML MLAVSLAVEA VADFLLRLAA 
GQAPWRFVIH QAAGLRAVLL LLQLAALVPL AIAVTPTSLY AAVPLLLFLL PVNVALSLYI 
AVVTLLRSLE RGVAPWISIA FIFFAASIMT PLFAFQDVVF RSLTALFLAL GLAYGQEKKE 
K