Gene Pcal_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0615 
Symbol 
ID4909718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp579836 
End bp580429 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content54% 
IMG OID640124364 
Producthypothetical protein 
Protein accessionYP_001055508 
Protein GI126459230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG CAAAGACGCG GGAAGTTTTA TACATACAGC TACTCGCCCT CCTGCGCACC 
TCCCCCACGC CCCGGGGCCG GCGCAATTTG GCAGAAGAGC TCAAAATAGG CGAGGGAGTC
GCCAGAGCGC TCTTAGAAGC CGGCCGCCAC CTCGGCCACA TCTACATCAT GAGAGGAGGG
GCAAAGATAA CCGAGGCGGG AGACACCTTT CTAAGGGACA TCTTTGCCAC ATGCAAAATA
GGCGCCGTGG TACCCATGAA CGACGCTGGG AAATACCTAT GCGGGAAAAG GTGCCTAGCC
TTCATAATAG ACGACAAAAT CCCCAACGCC GTGGCCATGA GAGACGAGCT CGTAAGACTA
GGAGCCTGCG GAGCATTAAT CGTAGAAAAA CAAGAAGACC TAGTCCTACC CCCGACATAT
GAAAAACTAA GAAAGTACAT ACCACAGCTG GCAGAGAACT TGTCAGAACA CCTCAGCCAA
GGCCAGAGCG CAGTGGTGAC CTGCGGCGAG ACATACGCAG ACGCGATGAG CTTTATACAG
ATAAGATGCA AAAACCTCTT GACAGGTGAT GAAGAGAACC CGGCGGACAT GTGA
 
Protein sequence
MRAAKTREVL YIQLLALLRT SPTPRGRRNL AEELKIGEGV ARALLEAGRH LGHIYIMRGG 
AKITEAGDTF LRDIFATCKI GAVVPMNDAG KYLCGKRCLA FIIDDKIPNA VAMRDELVRL
GACGALIVEK QEDLVLPPTY EKLRKYIPQL AENLSEHLSQ GQSAVVTCGE TYADAMSFIQ
IRCKNLLTGD EENPADM