Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0615 |
Symbol | |
ID | 4909718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 579836 |
End bp | 580429 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640124364 |
Product | hypothetical protein |
Protein accession | YP_001055508 |
Protein GI | 126459230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCG CAAAGACGCG GGAAGTTTTA TACATACAGC TACTCGCCCT CCTGCGCACC TCCCCCACGC CCCGGGGCCG GCGCAATTTG GCAGAAGAGC TCAAAATAGG CGAGGGAGTC GCCAGAGCGC TCTTAGAAGC CGGCCGCCAC CTCGGCCACA TCTACATCAT GAGAGGAGGG GCAAAGATAA CCGAGGCGGG AGACACCTTT CTAAGGGACA TCTTTGCCAC ATGCAAAATA GGCGCCGTGG TACCCATGAA CGACGCTGGG AAATACCTAT GCGGGAAAAG GTGCCTAGCC TTCATAATAG ACGACAAAAT CCCCAACGCC GTGGCCATGA GAGACGAGCT CGTAAGACTA GGAGCCTGCG GAGCATTAAT CGTAGAAAAA CAAGAAGACC TAGTCCTACC CCCGACATAT GAAAAACTAA GAAAGTACAT ACCACAGCTG GCAGAGAACT TGTCAGAACA CCTCAGCCAA GGCCAGAGCG CAGTGGTGAC CTGCGGCGAG ACATACGCAG ACGCGATGAG CTTTATACAG ATAAGATGCA AAAACCTCTT GACAGGTGAT GAAGAGAACC CGGCGGACAT GTGA
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Protein sequence | MRAAKTREVL YIQLLALLRT SPTPRGRRNL AEELKIGEGV ARALLEAGRH LGHIYIMRGG AKITEAGDTF LRDIFATCKI GAVVPMNDAG KYLCGKRCLA FIIDDKIPNA VAMRDELVRL GACGALIVEK QEDLVLPPTY EKLRKYIPQL AENLSEHLSQ GQSAVVTCGE TYADAMSFIQ IRCKNLLTGD EENPADM
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