| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0611 |
|---|
| Symbol | |
|---|
| ID | 4909847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 575231 |
|---|
| End bp | 576499 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640124359 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055504 |
|---|
| Protein GI | 126459226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTACA TCGCGCTAGT CCTTCTCCTG CCGCTAGCTG TGGCGGGGGC GGCGATAATA
GACGTAAGAG ATGCCCTCGG TTACCCAGTG CAAAACGCCA CGGTGTGCGT AGAGGGATTG
TGCAAATACA CAAACGCCAC GGGTCTCGTA GAGGTCCCAA CAGGCCCAGT GGAGATATAC
GTCGACGGCG TCCTGGCTTG GAGAACTTAC GCGGAAGGCC ACGTGGTGGC CACAATATAC
CGCGTAGGCG AAGTCGCCAT ATCTCCACTT CCCGCCGACG GCTATGTGGA CATATGGGTC
AAACTCCTAA ACGGGTCATA CGCCCGCTTG AGAATTAACT TTAGAAATAA TACACTAGAG
AGGGAGATAC CAGTAGGAAA TGTAAATTAC CCAGCGGAAA TACATATAGT CTCGGTGGCG
GGGCGCGCGG TCAATACAAC TGTTAAGACC AGCCTCTGGG AGCTGGGGGC AGACCTGGCG
GCCCTGGGCA TAGTAAAGAA GTGCACTATT TCAGCGAGAG AGCCAGTTAA GGCCATATAC
GTCTACAATG GGACAAACCT AGTAGCTGTC GGCCAGAATG TGACACTCTT TACGTTCAAT
ACGGCGGCCT ACTACGCCGT AGTAGAGACC GACGTGGTGG CGCCAAACGG CACAAGGTAC
AGGTGGAGAA TAGACGTAGC CAAGCACTGC GGCGGCGACG TTACGCCAAA TGCAAGTAGG
CTAGTAGTCA CAGCGGTGGA CTCCGCCGGC GCCGTTAGGT ACGACTGGGC CATCAGAATC
GCCAACGAAT CCTTCAGAGG AAGGGCAGAG CTCTGGGTTC TTCCAAACGC CACGTATATG
GTCGAGGTAG ACGCAGTACA CACTAAGAGG AGCGTGTCGG TACACGTGTC GAGGGCCGTG
GAAGAGGTGA CGATATCTGT GCCCACAGCG TACGTCGAGT TCCGCTACCA ACAGCCAGCC
CGGTGGGTGT ACATCATCGG AAACTATACG GCGAGAGAGG CAATGCCCAG GAGGGTGGAG
TTGCCCCCAG GCGTGTACAA GGTGGTGGTG GACTTAGGCG GCGTAAATGT GACATACACC
GTGTCACTGA GGCCCGGCGA AGTGGTAACG CTCACCGTTG AAAGGCCGCC ATCCTCAAAC
GAGACTGCGC AGAGTTACGA GGGCCTTTCA GCAGCCACCT ACGCTCTTTT GGTCGTCCTC
GCAACCTTCG TAGTAGTTGC AGTCGTTATT TTGAAGAAGT CAACTCGCCG AAGTTTTGCA
ACTCTTTGA
|
|---|
| Protein sequence | MRYIALVLLL PLAVAGAAII DVRDALGYPV QNATVCVEGL CKYTNATGLV EVPTGPVEIY
VDGVLAWRTY AEGHVVATIY RVGEVAISPL PADGYVDIWV KLLNGSYARL RINFRNNTLE
REIPVGNVNY PAEIHIVSVA GRAVNTTVKT SLWELGADLA ALGIVKKCTI SAREPVKAIY
VYNGTNLVAV GQNVTLFTFN TAAYYAVVET DVVAPNGTRY RWRIDVAKHC GGDVTPNASR
LVVTAVDSAG AVRYDWAIRI ANESFRGRAE LWVLPNATYM VEVDAVHTKR SVSVHVSRAV
EEVTISVPTA YVEFRYQQPA RWVYIIGNYT AREAMPRRVE LPPGVYKVVV DLGGVNVTYT
VSLRPGEVVT LTVERPPSSN ETAQSYEGLS AATYALLVVL ATFVVVAVVI LKKSTRRSFA
TL
|
|---|
| |