| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0609 |
|---|
| Symbol | |
|---|
| ID | 4908326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 572079 |
|---|
| End bp | 574547 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640124357 |
|---|
| Product | peptidase M1, membrane alanine aminopeptidase |
|---|
| Protein accession | YP_001055502 |
|---|
| Protein GI | 126459224 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACT TAGTGGGGAG GGACTTCGCC TTTCCCGAAT ATCTGCCTAG GCATCCGCGA
TCTTACGACT TCGACGTGGT TAAGATGAGC CTTGACGTTG AGGTAGATTT GGAAAATGGC
GCCGTTGAAG GCGTGGTGAA GTACGTCGTT AGGGCCAAAA AGAGCGGCGC AGTGGTTGTC
TTAGACGCTG TGGACATTGA GGTTTTGGGA GTTAGCCACG ACTATTTCTA CGATGGCGCC
AAGCTCGAGA TTCGCCCCGA GTGGAAGAGC GGGGAACAGG TGGAGGTGGT TGTGAGGTAT
CGGGCCAGGC CGAGGGTTGG CATGTTTTTC GTGAGGAGGG GCAAGGAGGT GTATATGTGG
ACACAGGGAG AGACCGAGTA TAACCGGTAC TGGGTCCCTC TGCCAGATTC GCCTAATGTG
AAATTCCCGT GGTCTGTGTC CATTACCGTC CCTAAGCCGT ATGTGGCTGG GAGCAACGGC
GTTTTGGTAG AGGTGAAGGA GAGGGGCGAC AAGCTGGTCT ACGTGTGGGA GATGCGGCAC
CCCATGTCGC CTTACTTGTT GGCGCTGGCT GTGGGCAATT TCAAGGTGTA TAAAGAGAAG
TGCGGCGATG TTGAGCTAGA GTACTATCTG CCTAGCTATG TGGGAGAAGA GTGGAAGTTC
TCGTTCTATA ACACGTGTAG CATTATGCAG TTTCTGTCGC AGTACTTGGG CGTGCCCTAT
CCCTATGAGC GTTACGCCCA GGTGGTAGTG CCTGAGTTCA TATATGGCGG CATGGAGAAT
ACGACGTTTA CAATTTTGAC AGATTGGACT ATCCACGATA AACACGCCCA GTGCCCCTAC
TCCGGCTTTC CGTGTCTAGA GCTGGAGGAC TTCTCGTCGC ACCCACTAGT TGCGCATGAG
ATGGCGCATA TGTGGTTTGG CGACTTGGTC ACGGCCAAGG ACTGGGCGCA TATAACTATC
AATGAGTCTT TTGCCACTTT TCTAGAGGCT CTGTGGACTG AGCGCTCCAA GGGAAGAGAT
GAGTACCTCT ACGAGATTTA TACAAACTTC AAAATATATC TGGGGGAGTA CTCTAGGCGC
TACTCGCGGC CAATTGTGAC AAATATATAC AAGATACCTG ACGAGGTGTT CGACCGCCAC
GCCTATGAGA AGGGGTCTGT GGTTTTGCAC ATGTTGAGGA GTCTCCTGGG CGACGAGGTG
TTTAGGAGGG GGCTCAAGAC GTTTCTAGAG AGGTATAGGT ACAAGGCCGT CGACGTCGAA
GACTTGAGGA AGGTTTTTGA AGAAGTGTCG GAGCGCGACT TGGAGTGGTT CTGGAACCAG
TTCTTCTACT CAGCTGGCCA CCCAGTGCTG AAGGTGTCTT GGAACTACTC CATGGAGGAC
AAGGCCGCGA GAGTGCAGAT TAGACAGACG CAGGGGGAGG ACAGCTTCCC CGTCTACACG
CTTCCGTTGG AGCTGAAGAT CGTGTATGAG GACGGCAGAA GGGAGGTCAA GTCCTTGGTG
CTTAACGACA AGGAGTTGAG CTTTACTTTA CATGGGAAGC CCAAGTACAT ATGCGTAGAT
CCTGGCTTTA AGATTTTGAA GTCGCTGGAT CCTCAGTACC CCCTGGAGTC CGCAGTGGCG
ATGTTGGAGG ACGAGGACCT CTACTGCAGG TTGCAGGCAG TGGAGGCGTT GAAGAAGAAC
GGTAGTCCAA AGGCCGTGGA CGCTCTTGCG AAGGCTCTGC GCGACAATTT CTGGGGCGTG
GCCTCTGAGG CGGCAAAGGC GTTGGGAGAG GTTGGAACTG CCGAGGCCGT GGCCAAGCTA
ATTGAGGCAT ACCCTGTCGT GGCTCATCCA AGGGCTAGGA GGGCCATCAT AGAGGCGCTT
GGCAATACAA GGCGGAGAGA GGCCGCCGAG TTTTTAGACA GAGTGCTCCA CGACGTGGGG
GAGAGCTACT ATGTGAGAGC CGAGGCGGCG AGGGCGTTGG GCAAGACTAG GTGGGAGTTC
GCCGAGCACA GCCTAAGAAA GGCCCTTGAG TATTCCAGCC ACTTGGAGGT TATTAAGAGG
GGGGCACTGG AGGGGTTGGC GGAGCTGGGT AGCGAGGAGG CTCTAAGGCT TGTGCTGAAA
TACGCAGAGG AGGGCGTGCC GACCGTTCTC AGGATGACCG CTGTGCAGGC CCTTGCAAAG
TTTGGCCCAC GTAGGGAGGT TCTTGAGGTT ATAAGGAGGG CGCTGAGGGA TGAGAATTTC
CGGGTCAGAT ACGCCGCAGT CGCCGCGGCG TTGGAACTCC TAGAGCCTAG GCTCTTGCCC
GACCTCGAGG AGAGGATTGA GCGCGACTTA GACGGCCGTA TTAGGCGCAT GGCGAGGGAG
GTTGTGGAAA AGATTAGGAA GGCCATGGAA CGCGGCGCTG AATACCAGCG GCTTAGAGAG
GAGGTGGAAA AGTTGCGTGA GGAGTATCGC AAGCTCCTCG ACCGCGTGGC TCGGCTGGAG
CGCGTCTGA
|
|---|
| Protein sequence | MKYLVGRDFA FPEYLPRHPR SYDFDVVKMS LDVEVDLENG AVEGVVKYVV RAKKSGAVVV
LDAVDIEVLG VSHDYFYDGA KLEIRPEWKS GEQVEVVVRY RARPRVGMFF VRRGKEVYMW
TQGETEYNRY WVPLPDSPNV KFPWSVSITV PKPYVAGSNG VLVEVKERGD KLVYVWEMRH
PMSPYLLALA VGNFKVYKEK CGDVELEYYL PSYVGEEWKF SFYNTCSIMQ FLSQYLGVPY
PYERYAQVVV PEFIYGGMEN TTFTILTDWT IHDKHAQCPY SGFPCLELED FSSHPLVAHE
MAHMWFGDLV TAKDWAHITI NESFATFLEA LWTERSKGRD EYLYEIYTNF KIYLGEYSRR
YSRPIVTNIY KIPDEVFDRH AYEKGSVVLH MLRSLLGDEV FRRGLKTFLE RYRYKAVDVE
DLRKVFEEVS ERDLEWFWNQ FFYSAGHPVL KVSWNYSMED KAARVQIRQT QGEDSFPVYT
LPLELKIVYE DGRREVKSLV LNDKELSFTL HGKPKYICVD PGFKILKSLD PQYPLESAVA
MLEDEDLYCR LQAVEALKKN GSPKAVDALA KALRDNFWGV ASEAAKALGE VGTAEAVAKL
IEAYPVVAHP RARRAIIEAL GNTRRREAAE FLDRVLHDVG ESYYVRAEAA RALGKTRWEF
AEHSLRKALE YSSHLEVIKR GALEGLAELG SEEALRLVLK YAEEGVPTVL RMTAVQALAK
FGPRREVLEV IRRALRDENF RVRYAAVAAA LELLEPRLLP DLEERIERDL DGRIRRMARE
VVEKIRKAME RGAEYQRLRE EVEKLREEYR KLLDRVARLE RV
|
|---|
| |