Gene Pcal_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0606 
Symbol 
ID4909068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp569944 
End bp570843 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content53% 
IMG OID640124354 
Productbifunctional phosphoglucose/phosphomannose isomerase 
Protein accessionYP_001055499 
Protein GI126459221 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID[TIGR02128] bifunctional phosphoglucose/phosphomannose isomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAACG ACTATCTGCA GTGGGAGAAG TTTATACTCC GCGGCGTAGA ATTCCCAACG 
AGATATCGAG TAGACGGAGA CGAAGTAGAA ATAACGCCGA GTAGCCGCCT CTATGTCAGC
GGAATGGGCG GCTCCGGCGT AGTGGGAGAC TTGATACGCG ATTTTTCAAT AGTATGGAAC
TGGGACGTCG AAGTGACAGT GGTCAAGGAC TACTTCCTCA GAGCCAGGGA CGGCCTCCTA
ATAGCTGTCT CATACTCGGG AAACACCGTG GAAACCCTCT ACTCCGTTGA GTACGCAAAG
AAGAGGAGAA TCCCAACCGT TGCCATCACC ACCGGCGGAA AGCTGGCGCA GATGGGCGTC
CCCACTATAA TTATACCAAA GGCCAGCGCC CCCCGCGCCG CGTTGCCACA GATGTTAACA
GCGGCGCTAC ACGTCGTAAG AAAGGTGTAT GGCATTCCCA TTGAAATACC AGAGGCATTA
GAGCCGCCGA ACGACCCACT GATACACAAG CTAATGGAGG ACTTTCAGAA GAGACCCACT
ATAGTTGCCC CAGAGACTAT GCGAGGCGTG GCCTACAGAG TGAAAAACGA GTTTAACGAA
AATGCGAAAA TTGAGCCATC TGTAGAAATT CTCCCAGAGG CCCACCACAA CTGGATAGAG
GGCTCAGAGC GGCCCATAGT AGCGCTCACA AGCCCCCACA TACCGAGAGA ACACCAAGAG
CGAGTAAAGG CGACCTTAGA AATACTTGGA GGCACCCTCT ATGTAGTTGA AATGAGCACA
AGAGGAGTGC TCACATTCCT CAGAGAAGTT GGGGTAGCCT CCATCAAGCT GGCAGAGAGC
AGAGGAGTGA ACCCGCTCGC TACCCCAAGA ATAGAGGCGT TAAAACGGCG CCTCCAATGA
 
Protein sequence
MLNDYLQWEK FILRGVEFPT RYRVDGDEVE ITPSSRLYVS GMGGSGVVGD LIRDFSIVWN 
WDVEVTVVKD YFLRARDGLL IAVSYSGNTV ETLYSVEYAK KRRIPTVAIT TGGKLAQMGV
PTIIIPKASA PRAALPQMLT AALHVVRKVY GIPIEIPEAL EPPNDPLIHK LMEDFQKRPT
IVAPETMRGV AYRVKNEFNE NAKIEPSVEI LPEAHHNWIE GSERPIVALT SPHIPREHQE
RVKATLEILG GTLYVVEMST RGVLTFLREV GVASIKLAES RGVNPLATPR IEALKRRLQ