| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0600 |
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| Symbol | |
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| ID | 4908674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 561514 |
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| End bp | 562677 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640124348 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001055493 |
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| Protein GI | 126459215 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4346] Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACG CCGTGGCTCT CCTAGTCGTA CTGGCCGTAT ACGCATATCT CGCATACTCC
GTGGCCTCCC TAGGCGGCGT AGACGGCTTG CCCGATGGCC CCGGATACAT AAGCGACGAG
GTGTGGTATG TCACATCGGC GCGCAACATT TTGCACGACT TCTTCAAGAC CCCCGCCTCA
TCGCCGTATT ACACAACCAC CTGGCCCTGC GTCAGCAACG CCACTGTGGT AAAGACGTAC
AAGGAAATAG ACGCGGTGAC AGTTGTGGGA AATGTCACAT GTTACGTCAG GCGGGGGTTC
CCCTATCCAG ATAAAGAGGG CATCTTGACT TACTACAACT TAGAACATCC ACCGCTCGCC
AAGTACGTGA TAGCGCTAAT GGAAGTTGTC AGAGACGAGC CCATCTTTTG GAGAGCCCCG
TCAGTTGCTC TAGGCGCTGG CACTCTGCTC CTCGTCTATT TAACTGCGCG CAGGCTAACC
GGCAGACTGT GGGCCTTGGT GACCACGACA TTGATGCTGT TCGATAGCAC TTTCAGAGCC
ATGGCCGGCA TCGCCATGCT TGATATATAT CTCGCGTTTT TTACAGCACT TTTGACATAC
TTCTACGTGG CTGGGAGAGA TTTGGCGACA GGCGCCGCCT TAGGTCTCGC AGTTTCTGTC
AAGTACTCCG GGGCTTTTCC AATATTCGGC CTGGCCTATT TGTACGCTAA AAAGAGCTTG
TGGAAATTCG TCGCAGTGGT GCTTATGGCC ACCTCTGTTT TCTTACTCGT CAACATGCCA
ATGGCCGCCC AGTTGGGCCT ACAGAGGTGG CTCCATGAAG TCCTCGCCGC GTTTGCATGG
CACACGACCT CGCGGCCAGA GGGGCCAATA GCCTCAACTC CCTTGGACTG GCTAATTATG
CGCAACAGCT TCGCGCTCTA TCTAAACCCC AACATTTATG CAGGCGGAAC GCCCGCGTAC
TTGCTCGCAC TAATATACGC TATTTACAAA CGCGACGACG TCTCAGTGCT CTACATCTCG
ACGTATGGGG GCTACTGGAT TGTATATGCG CTTGGAAATC GCACGCTCTA CTCTTTCTAC
ACTGTCCACT TCTCCCCCAT CGCCCACATA CTCTTGGCAC AGCTTCTAGC CTCTGTTGCT
AAACCTTGGA GGACTGTATC TTAG
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| Protein sequence | MKYAVALLVV LAVYAYLAYS VASLGGVDGL PDGPGYISDE VWYVTSARNI LHDFFKTPAS
SPYYTTTWPC VSNATVVKTY KEIDAVTVVG NVTCYVRRGF PYPDKEGILT YYNLEHPPLA
KYVIALMEVV RDEPIFWRAP SVALGAGTLL LVYLTARRLT GRLWALVTTT LMLFDSTFRA
MAGIAMLDIY LAFFTALLTY FYVAGRDLAT GAALGLAVSV KYSGAFPIFG LAYLYAKKSL
WKFVAVVLMA TSVFLLVNMP MAAQLGLQRW LHEVLAAFAW HTTSRPEGPI ASTPLDWLIM
RNSFALYLNP NIYAGGTPAY LLALIYAIYK RDDVSVLYIS TYGGYWIVYA LGNRTLYSFY
TVHFSPIAHI LLAQLLASVA KPWRTVS
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