| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0595 |
|---|
| Symbol | |
|---|
| ID | 4908328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 557958 |
|---|
| End bp | 559034 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640124343 |
|---|
| Product | N(2),N(2)-dimethylguanosine tRNA methyltransferase |
|---|
| Protein accession | YP_001055488 |
|---|
| Protein GI | 126459210 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1867] N2,N2-dimethylguanosine tRNA methyltransferase |
|---|
| TIGRFAM ID | [TIGR00308] tRNA(guanine-26,N2-N2) methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGACT ACGTAATAAG GCGAGAGGGC AAGGCGGTAT TCTACGCCCC AAACCCCAAG
AAGTACGACA TATATTCAGC GCCGGTGTTT TACAACCCGG CCATGGAGAA GAATAGGACA
CTGTCTGTTC TCTTGCTGAA GGTCGCTGGC GCTCAGATGG GGGGTGGCTT GACCGTATGT
GAGCCTCTCA GCGGCACTGG CATTCGTGGA ATAAGATATG TAATAGAAAG CGGAGTTGTT
GGAAAACTAA TTTTAAACGA TTTGTCAAAA GAAGCTGTAC ATGTAATTCA AAAGAACTTG
TCTATAAACG GCGTAGAAGC AGATGTATAT AACGAAGATG CAAATGTCTT GTTGCACAAA
CTCAGGGGGC AATGCGACGT AGTAGACGTA GACCCCTTCG GTTCGCCGGC GCCCTTCCTA
AGCGCTGCAT TTAGAGCTCT CAAAAATGAG GGCATTGTAT GTGCCACTGC GACAGATACC
GCAGTTCTCG TGGGCAGATA TCCTAGGAAG TGTCTACGGA GGTACGGCTC GGTCATAAGA
AAAAGCCCCT TCTACCTAGA GATGGGGCTT CGCAACCTAG TGGGATACGT GGCACGGATC
GCCGCTTCTG AAGATTTTGC AATACGCCCA CTCTTGTCGT ACTGGGAAGG CCACTATTTT
AGAACCTGTG TCTACGCCGT AAAAAGCGCA AAGGACGCAG ATGACATGTT GCAGAGAGAT
GTGGGCTATG TGGAATACAG AAGGTATCGG AAAGTCACAA GGCGGCAGAG CGAATATACA
TCAGGCCCAG TGTGGATCGG CGAGTTAGGA GATCCGTCGA TTGCCTTCTT TATGGCGAGG
GAAGGCCAGT ACAGCGACTT TTTAAAACTC TTGGAAGAGG AATACTCTGT GTCTCTTCCA
TGGTTTTACA AGTTACCCGA GTTCGCCGTG GACGGGAAGA GCCCGACGCT AGAAGAGGCC
ATGGCGGCAT TAAGGAGGGC CGGAGTATAC GCGGCACGTA CACATATGGC CAGCGACGGC
TTTAAGGCAG AGGCCACGTA CGGAGAAGTG GAAAGAGTTT TGAGACGCGT GACTTAG
|
|---|
| Protein sequence | MDDYVIRREG KAVFYAPNPK KYDIYSAPVF YNPAMEKNRT LSVLLLKVAG AQMGGGLTVC
EPLSGTGIRG IRYVIESGVV GKLILNDLSK EAVHVIQKNL SINGVEADVY NEDANVLLHK
LRGQCDVVDV DPFGSPAPFL SAAFRALKNE GIVCATATDT AVLVGRYPRK CLRRYGSVIR
KSPFYLEMGL RNLVGYVARI AASEDFAIRP LLSYWEGHYF RTCVYAVKSA KDADDMLQRD
VGYVEYRRYR KVTRRQSEYT SGPVWIGELG DPSIAFFMAR EGQYSDFLKL LEEEYSVSLP
WFYKLPEFAV DGKSPTLEEA MAALRRAGVY AARTHMASDG FKAEATYGEV ERVLRRVT
|
|---|
| |