| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0588 |
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| Symbol | |
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| ID | 4908794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 553085 |
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| End bp | 553558 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640124336 |
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| Product | 50S ribosomal protein L13E |
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| Protein accession | YP_001055481 |
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| Protein GI | 126459203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4352] Ribosomal protein L13E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCCA AGCCTGTGGT ACAAGTCCCA AGAAGCATCA AGAGCGGTGG AGTAACCAAG
TGGAAAGAGG GGAGGGGCTT TTCACTTGGC GAGTTGAAAG AGGTTGGTCT TAACGCAGAA
CAAGCAAGGC TTTTAGGCCT GCCAGTAGAT ACGCGACGTG ACTCTGTGTG GCCTCAAAAC
GTGGAAGCCC TTAGGAAGTG GCTTATAGAG GTATTGGAGG GCAAAGCGAC GCCGCCTGAA
CCTACGCTTC CAAAAGTCGT TAAAGTGAAG AGGAAGAGAG GCAGGGCGTT TAGAGGTCTG
ACGAGCGCTG GGCGGAGGTC GCGCGGCTTA ATTTCGACCA GATTCAGAGA GACCCACAAC
TACAAGTTTA AGAAGAAGGC TAAGGAGAGG AGGCTGAAGA AGAGACACGA GGCCACTAAA
GGACTTGGAA ATGTGTTGAG AATTTCGAGG ATAATAAACG AGTCCAAAGA ATAG
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| Protein sequence | MIPKPVVQVP RSIKSGGVTK WKEGRGFSLG ELKEVGLNAE QARLLGLPVD TRRDSVWPQN
VEALRKWLIE VLEGKATPPE PTLPKVVKVK RKRGRAFRGL TSAGRRSRGL ISTRFRETHN
YKFKKKAKER RLKKRHEATK GLGNVLRISR IINESKE
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