| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0577 |
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| Symbol | |
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| ID | 4908649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 544974 |
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| End bp | 545831 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640124325 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055470 |
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| Protein GI | 126459192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGG TGCCCTGCCC CTCCTGTGGC CGCCTCGTGG ATAAACTAAT AGAGGGGCTG
TGCGAAGACT GCTACATCGA GCGACACCCT CTCGTTGAGT ACAGGGAAGG AGAAATTCTT
CGATGCAAGT ACTGTGGCGC AGTGTTCTTA AAAGGTAAAT GGATGAGGGG GAGGGGGGAT
CAGGTCTTCT TAAAGATACT GAGTGAAAAG GGCAAGGTCG TTGGAAAAGT AGAACAAATA
GATGCTAGAG ACTTCACAGA CTATGCCGAA TTATTTCTCA CATTGCATGG ATCTCCGCAT
CCAGAAATAC CGCCGCGTAC ACTTAAGTAC AATATAAGAA TACCTTTTAA GCTTGACATA
TGTAATGTTT GTATGGAGAA GTTGAGTAAG AGGGAGGTGG CTGTTCTTCA AATTAGGGCT
AGTCCAAGGC CACTGGATGC TGAATTTAAA AAGAAAATTT TGCATATAGT AGAGCAAGAA
TTATTAAAGT TAAAAAGTAA AAAAATAGGA TTTGTTTCTA GTATTAAAGA AGCGGCAAGC
GGCATTGACA TATATACTAC TTCGGCAAAT TTGGCCAGAC ACTTAGCTCG CGTAATTCAT
GAGACATGGC CGAGTTACGC CATGGAGACC GCCAAAGTCG TAGGCATTAG AGATGGGAAA
AAAGTGTACC ACATGACATA TCTTGTGCGT CTATTTACAT ACCGGGTGGG AGATTTGATA
ATAGTAGGAG GAAGTGAGAA GGTGGTTACA GAGTTAAACA ACAAGTATAT AGGTGTTCGT
GATGTCCAAA GTGGGGGGTA TGAACAAATA CCTATTTCGG ATTTTGTCCA TAAAACTGTT
CTATACAAAG GAAGTTAA
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| Protein sequence | MAKVPCPSCG RLVDKLIEGL CEDCYIERHP LVEYREGEIL RCKYCGAVFL KGKWMRGRGD
QVFLKILSEK GKVVGKVEQI DARDFTDYAE LFLTLHGSPH PEIPPRTLKY NIRIPFKLDI
CNVCMEKLSK REVAVLQIRA SPRPLDAEFK KKILHIVEQE LLKLKSKKIG FVSSIKEAAS
GIDIYTTSAN LARHLARVIH ETWPSYAMET AKVVGIRDGK KVYHMTYLVR LFTYRVGDLI
IVGGSEKVVT ELNNKYIGVR DVQSGGYEQI PISDFVHKTV LYKGS
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