Gene Pcal_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0573 
SymbolpheT 
ID4909995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp541517 
End bp543064 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content52% 
IMG OID640124321 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001055466 
Protein GI126459188 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00471] phenylalanyl-tRNA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTAA TTGATGTAGC GAAATTCGAC TTAGAGCGTC TGGTAGGCCT TCGTTTTGAA 
GAAATTGTAA AACTGTTGGA ATATGTAAAA TGTGAAATAG AGGAAGATGT GGGGGAGAGA
GTAAGACTGG AGGTTACACA CGATAGGCCA GACCACTTCT CCGCCGAGGG ACTCGCAAGA
ACTTTGAAAG GCGTGGCAGG CGTCGAGACA GGTCTCCCCG TCGTAAGCCT CACTACCTCC
TCTGTTAAAC TCGTGGCTGA CTACATAGAG GAGAGGCCGT ACATATCTAT GGCTGTGGTC
AGAGACGTCG CCTTAGACGA CGAGGCCATT AGACAGTTAA TACAGCTACA GGAGAAGTTA
CACGAGACAT ATGGGAGAGG GAGGCGGAAA ATAGCGATAG GGTTCTACGA CGTTTCTAAG
ATAAAACCGC CTATACGCTA TACGCGCGTA TCACGAGACG ACGAGTATAC GCCTCTCGGC
TTCACATCCC CCATACCCAT TAGAGAGATG TATGAGAAGA CGGAACAGGG GAGGAAGTAC
TCCCAGCTCA TAAACCGGGA AAACCCCCCG GCACTGGTAG ACGCCGCGGG GCAAATAATG
GTGGTTGTGC CAGTGCTAGG CTCCGAGTGT TGTAAAATAA CTGAGAAGAC CAGGGCTGTC
CTAATAGATG TCACAGGAAC AGATCTACAG GCTGTATCAA ACGCCATGTC CGTCTTAATC
TATGCACTCA TAGAGAGGGG CAGAAGCAAG GAAGTGGAAA TAGTCGAGGG GGGCAATACA
TATGTACACA GATACACGAG GATAAAGGTA AGCAAGGAGG ACGTGGAAAA CCTCTTAGGC
ATGCGCATGA GACAAGAGGA GTTTGAGAGA TACCTAGGAA AGGCCAGGCT AGGCTACGAG
GCGGGCGAGG CCGTGGCGCC GCCCTATAGA ATCAACATGT TGTCGTGGGT AGACGTCGCA
GAAGAGGTGG CAATAGTGCT TGGGTATAAC AATTTACCAC TAGAAACGCC GCCTATTTTC
ACGGCTGGCA GGCGCCACAA GACAGAGATC TTCACCGAGG AGCTTAGGAA GACGCTCCTG
GCTATGGGTT TCGCTGAGGT GAACAACTAC GTCTTGACCA GCGGAGTTGT TACAACATTC
TGCAAACCCG CAACGGTGCT GAACCCAATA TCGGAGCTCT ATGACACAGT TAGATGCTCT
ATTATCCCAC AGCTTATCGC CACAGCCGCC CTAACGAGGC GGAAAGAGGT AAAACTCTTC
GAAGTAGGGG ACGTAGTTAG AGAGGGCAGG ACTAGGAGGA CGTTGACGCT TCTAATAAGC
AGAGAGGGGG CCACTCTCAC AGACGGGCTC TCTGTAGTAA AAACCCTCTG CAGACTCCAT
GGCCTTACAT GCGAAATAGG CCCCACCGCG GCGGAGTGGG CACTACCAAA CAGATCCGCA
GCCGTGAGGG GGGACGTGGA GGGCTACGTC GCCGAGGTGA ATCCCCAAAT ATTGATATCC
CTGGGATACA CCGTGCCCAC AGTGGTGGCA GAGCTCTTCG TAGATTAA
 
Protein sequence
MPVIDVAKFD LERLVGLRFE EIVKLLEYVK CEIEEDVGER VRLEVTHDRP DHFSAEGLAR 
TLKGVAGVET GLPVVSLTTS SVKLVADYIE ERPYISMAVV RDVALDDEAI RQLIQLQEKL
HETYGRGRRK IAIGFYDVSK IKPPIRYTRV SRDDEYTPLG FTSPIPIREM YEKTEQGRKY
SQLINRENPP ALVDAAGQIM VVVPVLGSEC CKITEKTRAV LIDVTGTDLQ AVSNAMSVLI
YALIERGRSK EVEIVEGGNT YVHRYTRIKV SKEDVENLLG MRMRQEEFER YLGKARLGYE
AGEAVAPPYR INMLSWVDVA EEVAIVLGYN NLPLETPPIF TAGRRHKTEI FTEELRKTLL
AMGFAEVNNY VLTSGVVTTF CKPATVLNPI SELYDTVRCS IIPQLIATAA LTRRKEVKLF
EVGDVVREGR TRRTLTLLIS REGATLTDGL SVVKTLCRLH GLTCEIGPTA AEWALPNRSA
AVRGDVEGYV AEVNPQILIS LGYTVPTVVA ELFVD