Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0566 |
Symbol | |
ID | 4910242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 537413 |
End bp | 538429 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640124314 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_001055459 |
Protein GI | 126459181 |
COG category | [C] Energy production and conversion |
COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGG TTGAGCGATT TGAAGTACCT AGGACCATAA TATTTGGACC CGGCGCCTTA GAGAAGACGC CAGAGGTAAT ACCCCCCTCC GGCAGAGTAC TCATTATCAC TGGGAAATCC TCCACGCGTA AATACGCCGA GCGAGTGGCA GAGCTGTTAA AGCAAAACTG TGAAATAATC AGCTACGACC AAGTCGAGCT GGAGAAGCCC GGCTTCGACC TAGTAATAGG AATAGGAGGA GGGAGGCCGT TGGACATGGC AAAGGTGTAC TCCTACATAC ATAAGAAGCC GTTTGTAGCA ATTCCCACGT CCGCCAGCCA CGACGGAATT GCTTCTCCAT ACGTCTCCTT CTCTCTTACA CAGCGCTTCT CGAAATACGG CAAAATATCC TCCTCCCCCG TGGCAATAAT AGCAGACACA TCCATCATAC TAAGTGCGCC ATCGCGGCTT CTAAAGGCTG GCATAGGCGA CCTCTTGGGA AAAATTATTG CAGTTAGAGA TTGGCAACTT GCCCATAGGC TAAAGGGCGA GGAGTACAGT GAATATGCGG CACACCTGTC TCTCACAAGC TACAAGATAG CGGTAGGAAA CGCCCAGAAG ATAAAAAACT TCATCCGCGA AGAAGACGTC AGAGTCCTTG TAAAGGCCCT CATCGGCTGC GGAGTCGCAA TGGGGATAGC CGGCTCGTCA AGGCCTTGTA GCGGCTCTGA ACACCTCTTT GCCCACGCAA TAGAGGTGAG AGTTGAGAAA GAAGACGAGG TTGTACACGG AGAATTAGTG GCCCTTGGCA CAATTATCAT GGCCTATCTA CACGGCATAA ACTGGAGACG CATCAAGAGG ATAGCGGACA TAATAGGCCT CCCTACGTCA CTACGTCAGG CGAATATAGA CGTGGATCTA GCCCTAGAGG CCTTGACCAC CGCCCACACC CTCAGACCAG ATAGATATAC TATACTCGGG GACGGCCTCA GTAGAGAAGC CGCCAAGAGG GCGCTGGAGG ACGTGGAACT TATATAA
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Protein sequence | MKKVERFEVP RTIIFGPGAL EKTPEVIPPS GRVLIITGKS STRKYAERVA ELLKQNCEII SYDQVELEKP GFDLVIGIGG GRPLDMAKVY SYIHKKPFVA IPTSASHDGI ASPYVSFSLT QRFSKYGKIS SSPVAIIADT SIILSAPSRL LKAGIGDLLG KIIAVRDWQL AHRLKGEEYS EYAAHLSLTS YKIAVGNAQK IKNFIREEDV RVLVKALIGC GVAMGIAGSS RPCSGSEHLF AHAIEVRVEK EDEVVHGELV ALGTIIMAYL HGINWRRIKR IADIIGLPTS LRQANIDVDL ALEALTTAHT LRPDRYTILG DGLSREAAKR ALEDVELI
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