Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0556 |
Symbol | rpl22p |
ID | 4908983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 528645 |
End bp | 529151 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640124303 |
Product | 50S ribosomal protein L22P |
Protein accession | YP_001055449 |
Protein GI | 126459171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAAGA AGTACGGAGT AAGAATAACC CCAGAGCAGA TAGCCAAGGC CTACGCCCCT GAGCAGAGAA TGTCATGGAA AAAGAGCGTG GAAGTGGCCA GGTTTATCAA AGGGATGACT CTTAAACAGG CAAAGGCGTG GCTAGAGGAC GTGGTAAAGC TAAAGAGACC AATCCCTATA AAGACATTCA AAAAGAAGCA GGCCCACCAC GCAACGCCCT GGGAGGGGTG GCCAGTGGCC AAGTGGCCCG TAAAAGTGGC CAAGAGATAC CTCCAACTCC TCGAAAACCT AGAAAACAAC GCCAAGTTCA AAGGCCTCGA CGTAGAGCGC CTAGTCATTA TCCACGCCGC CGCCCACAAG GGGATAAAAA TCCCCAACAT CATGCCGCGT GCCTTCGGTA GAGCAACACC ATTCAACGAG GAGACAGTAA ACGTGGAGAT AGTAGCCGCA GAGCTCCCCA AGGAGGTTGT GCCAAAACGC TACAAGCTAA ACCTAGTAAA ACGCTAG
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Protein sequence | MFKKYGVRIT PEQIAKAYAP EQRMSWKKSV EVARFIKGMT LKQAKAWLED VVKLKRPIPI KTFKKKQAHH ATPWEGWPVA KWPVKVAKRY LQLLENLENN AKFKGLDVER LVIIHAAAHK GIKIPNIMPR AFGRATPFNE ETVNVEIVAA ELPKEVVPKR YKLNLVKR
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