Gene Pcal_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0556 
Symbolrpl22p 
ID4908983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp528645 
End bp529151 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content51% 
IMG OID640124303 
Product50S ribosomal protein L22P 
Protein accessionYP_001055449 
Protein GI126459171 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAGA AGTACGGAGT AAGAATAACC CCAGAGCAGA TAGCCAAGGC CTACGCCCCT 
GAGCAGAGAA TGTCATGGAA AAAGAGCGTG GAAGTGGCCA GGTTTATCAA AGGGATGACT
CTTAAACAGG CAAAGGCGTG GCTAGAGGAC GTGGTAAAGC TAAAGAGACC AATCCCTATA
AAGACATTCA AAAAGAAGCA GGCCCACCAC GCAACGCCCT GGGAGGGGTG GCCAGTGGCC
AAGTGGCCCG TAAAAGTGGC CAAGAGATAC CTCCAACTCC TCGAAAACCT AGAAAACAAC
GCCAAGTTCA AAGGCCTCGA CGTAGAGCGC CTAGTCATTA TCCACGCCGC CGCCCACAAG
GGGATAAAAA TCCCCAACAT CATGCCGCGT GCCTTCGGTA GAGCAACACC ATTCAACGAG
GAGACAGTAA ACGTGGAGAT AGTAGCCGCA GAGCTCCCCA AGGAGGTTGT GCCAAAACGC
TACAAGCTAA ACCTAGTAAA ACGCTAG
 
Protein sequence
MFKKYGVRIT PEQIAKAYAP EQRMSWKKSV EVARFIKGMT LKQAKAWLED VVKLKRPIPI 
KTFKKKQAHH ATPWEGWPVA KWPVKVAKRY LQLLENLENN AKFKGLDVER LVIIHAAAHK
GIKIPNIMPR AFGRATPFNE ETVNVEIVAA ELPKEVVPKR YKLNLVKR