Gene Pcal_0554 details

Gene Information

• Locus tag: Pcal_0554
• ID: 4908961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 527031
• End bp: 527726
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640124301
• Product: hydrolase
• Protein accession: YP_001055447
• Protein GI: 126459169
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACTG TCCTAGTGGA CTTGGATGGG ACGCTCATCC CGCTCGACGC TTGGGAGCCC 
GTGTTTTTAG AAGTATGCGA GAGGATTGCC CGCCAGGTGG GGGCCACGGC TGAGGAGGTG 
TGGAAGAGGG CGCGGCGCAG GAATCTAGAA CTTATGAGGG CCTTCGCCGT GGAGGCCTTT 
GACTGGCAGA GCTTGTTTCG CTCTGTGGCA GAGGAGCTGG GGGCACGGGA GGTGCCAGAC 
TTGGTGGAGG TCTTGTACAA ACACATCCAC ACGTTTAGGG TGAATAGGGG GGCATTTGAG 
GCGTTGCGCA GGCTTAGGGA GGCTGGCCAC AGGGTCGAAA TTGCTACCAA CGGCCTTGCT 
GTTTATCAAA TGGTGGTTAT TAAACACCTC GGCTTAGACG GGCTGATAGA TGGCGTCAGG 
ACGTCGGACC GCTTTGGCTG CCCTAAGACG TGCCCTCAAT ACTTCCAAGG CGCCGATGTA 
ATGGTAGGCG ACAACGCCGT CTTTGACGTA TATTTCCCGC AACGCTTCGG CCTCTTGACT 
ATCTTCTACG GAGATTGGGA CAGGGCGGCG CGGGTATACG GCGAGAGACT TGGCGTCGAC 
CTCACCTCTA CGAGGCCCGA CGCGGAGATA GACTCGCTGG AGGAGTTGCC TGAGGCTGTG 
GAGACGGTGC TTAAGAGGAG GCTCAGCAAG GGGTGA 

 

Protein sequence

MATVLVDLDG TLIPLDAWEP VFLEVCERIA RQVGATAEEV WKRARRRNLE LMRAFAVEAF 
DWQSLFRSVA EELGAREVPD LVEVLYKHIH TFRVNRGAFE ALRRLREAGH RVEIATNGLA 
VYQMVVIKHL GLDGLIDGVR TSDRFGCPKT CPQYFQGADV MVGDNAVFDV YFPQRFGLLT 
IFYGDWDRAA RVYGERLGVD LTSTRPDAEI DSLEELPEAV ETVLKRRLSK G