| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0553 |
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| Symbol | rps3p |
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| ID | 4909827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 526294 |
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| End bp | 526956 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640124300 |
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| Product | 30S ribosomal protein S3P |
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| Protein accession | YP_001055446 |
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| Protein GI | 126459168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGTGG CGATGTCTAC TGCGCAGAGG AGGTTGCCCG TCTACAAGAA GATCTTGGAG
GAGAATAAGA AGAAGTGGAT GATTAAGGAG TTCCTGGAGT ACAGGCTTGC GAAATACGGC
TACATAGACT CCGAGATTTT GAAGACTCCT CTTGGCACGC GTATTGTCAT ATATGCCGAG
AGGCCTTCCA GGATTATAGG GAGGAAAGGC GCCATAGTGA AAGAGGTTAG TAGCATTTTG
GCTAATAAGC TAGGCGTGGA GAATCCACAG ATCGACGTAA TAGACGTCTC CAAGATAGAG
GCCCCAGAGC TGTTTCCCAA GGTCGTTGCG TATAGAATTG CCAACGCCAT GGCTAGGGGG
GTTAGATTTA GGCGCGTCAT GTTTGTGGCA GTTAGACAGC TCATGGAGGC CGGGGCCAAG
GGCTTTGAAA TTGTGGTCAG CGGAAAGCTC TCCACCGAGA GGGCCAAGTT TGAAAAAATT
ACGTACGGCA AGTTGTATAA GATAGGGTAT GATGCGAAGA ACCGGGTGAG GAGGGCTGTT
GTGCACGTCC TCCTGAAGCC TGGCATATAC GGCATAGAGG TCAGAATTAC GCCAGCGACG
CTTCGGTACT CCGACGAGTA TAAGATAAAG CCGCCTACGA GGCCGGAGGC CGCCGCCCAA
TAA
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| Protein sequence | MSVAMSTAQR RLPVYKKILE ENKKKWMIKE FLEYRLAKYG YIDSEILKTP LGTRIVIYAE
RPSRIIGRKG AIVKEVSSIL ANKLGVENPQ IDVIDVSKIE APELFPKVVA YRIANAMARG
VRFRRVMFVA VRQLMEAGAK GFEIVVSGKL STERAKFEKI TYGKLYKIGY DAKNRVRRAV
VHVLLKPGIY GIEVRITPAT LRYSDEYKIK PPTRPEAAAQ
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