| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0549 |
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| Symbol | |
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| ID | 4909011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 522833 |
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| End bp | 525130 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124296 |
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| Product | V-type ATPase, 116 kDa subunit |
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| Protein accession | YP_001055442 |
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| Protein GI | 126459164 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTTAG AAAGAGTTGT CGAGTTTAGA ATTGCTGGAA ACGTCGAGCT CCTCCCCGAG
CTGATATACT TCATAGGGAA GGCCGGCGTG GCGATGTTCG AGGATAGACC TGAGAAGCTC
CCAAAGCCCA GAGATCCCGC CATTCTGCAA CAGGCGAAGA GGCTTGGCGA GATGTTGGGC
CAACTATCTG CCTACCTCCA GCCGAAGACC GTGCCCCTGC CCCTCAGCTC GCTAGAGGAG
CAGATCGGCC AAGTGCTCGA AAAATTGGAG GGCGTGACTA AGGAGGTATC GTATTATGCA
AGGCTTATGG ACGAGCTTAA GACGAAGCTC GCAATATCGC GGGAGTTGTC TAGCTTCAAG
GCGCTTCGCC CGCCTGCCAC AGAGGCCGTG GATGTGTTTA TAGTCTTGGC TGGGAGAAGC
GCCAAGGAAG TGGCCGAGCT CTGTAAGTCG TTTAATGCGG CAGTTGTACA ACAAGGCAAC
GTTTTCATGA TAACGGCGGA GCGCAAGTTT GCGCAACAGC TCAAGTCGGC GCTGGAGAAG
CTGGGCGTAC AACTGTTCAC GTTCAAAGAG CTGGAGGAGA TAGAGCCTCA GGAGGCGCTG
GAGGAGAAGC TGAGACAGGC TGAGAGGGGG CTTAGAGAGG CGTTGGAGAG ACACAGAGAG
GTCTTAGACT ACGCACACAC TCTCAGGGAG GCGCTTGCCT TAGTTATTGA CGTATTTAAC
AGGTCTGCAA TAGACGAGGG CACAGAGATG GGCCGCCTCT TTGCCTCTTA TGAAGCTGAA
ATAAAGAGGT TGGAAGCACA GCTGTCGAAC CTTCACAAGA TTAGGAAGGT CTTAGACGCG
TTAAGCGGGG GCGTGAAAAT ACCTGAAGGC TTTAAACTCT TCATAGACCC ACAAATGCCT
ATAAACGCAC CTCACATAAT ACAGGAGATA GACGGGGTTA AAGTGGCCTT AGTCAAGGGG
GAGGCAAAGG GCGTGGAGGT GCCCTCCGAG TATCTCTTGG ACGTAGAAAA TGGCAAGAGA
GTAGTAGAAG AGGCGATAAA GTCAACGGAA GCGGCTCTAC AACGCGTTAA AAGAGAGCGT
GAGGCCTTGG AGAGGCTTTA CAGCGAATAC TCCGTGTACG GGGACAAGAG GTGGGATGAG
CACAATGACG TGGCCACGCT AATATTCTAC GTCTTAGAGC GCGACGTGAA GAAGGTGGAC
GACGCCCTTG TGGAATTTGT CAGGAAAAAC TCTGCCAAGC TAGACATCGT TAAGAGGGTG
AGGTATAAGT ACATTGACAG AGTTCCAGCG GAGCGGAGGC CCACCCTGGA GAAGTACCCA
GCTCCGATAA GGCAGTTTAC AAAAATTGTA TACATGTACG GAGTGCCGAA GCCCATCGAG
ATAAGCCCAG TGCCCCTCGT GGCTTTGATA TTCCCAGTCT TCTTTGGCTG GATGTACGGA
GACCTCGGCC ACGGATCTCT CCTCTTCCTA CTCGGGATCT TACTATTGAC AAAGCTCTAC
GGGGGGAGGC ATAGGGACTG GGGGGTCATA TGGACTATAA CAGGCCTTGT CTCAATGTTC
TTCGGCGCCT TCGTCTACCA AGAGGCCTTC GGCTTCCACC TAGAGGAGTT TGGAATACAC
CTGCCCACAG CCCCCATACT CCCCTTATTT GGACACAAGA CGTTTGTGGA AGTCGACGGC
GTAAAGGCGT CGCTGGCAGC GGCGTTTCTG CTGGGGTTCC TACTTCTACT GCTCGCATTC
CTCTCCAAGC TCATAAACAC TGTGCTTAAG GGCGAGGGAG ACGTGGCGCT CGCCATCGCG
CTCCCCCAGC TGTTGTTCTT CTTCTCGCTT GGCATGGTGT TCTTCTCTCT CATCTGGCAG
CCCATGGGCA TGTACTACTT AGAGCCGTTG ATGGGGCTTC CATGGGGGTA TTTAGCCCTA
CTCTTCATAG TTTGGAGCGC CATCGGCGTC GTCGTAATAA GAGCGAGGTA TAGACACCAC
GAGGAGGCCC CGCCGGTGGT AGACGAATTT ATAGTGGGAA TCGTCGAGGG GGCACTTGGC
GCATTGGCCA ACATACCCAG CTTCTCCCGT CTGGTAATCC TCATAATGAT ACACGGAGTT
CTCACAAAGC TCGTCAACGG CGTGGCCCTC GGCCTAGGAG CCCCCGGAAT CCTATTCGCC
GTGTTTGGAC ACGCCCTAAT TGCAGCAGCT GAGGGCCTCT TCTCGTTTGT CCAATCGCTC
CGCCTCGTCT TCTACGAGGT GCTCTCTAAG TTCTACGAGG GGAAGGGCAG GCTTTTCCAG
CCGTTGGTAC TGCCGTAA
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| Protein sequence | MPLERVVEFR IAGNVELLPE LIYFIGKAGV AMFEDRPEKL PKPRDPAILQ QAKRLGEMLG
QLSAYLQPKT VPLPLSSLEE QIGQVLEKLE GVTKEVSYYA RLMDELKTKL AISRELSSFK
ALRPPATEAV DVFIVLAGRS AKEVAELCKS FNAAVVQQGN VFMITAERKF AQQLKSALEK
LGVQLFTFKE LEEIEPQEAL EEKLRQAERG LREALERHRE VLDYAHTLRE ALALVIDVFN
RSAIDEGTEM GRLFASYEAE IKRLEAQLSN LHKIRKVLDA LSGGVKIPEG FKLFIDPQMP
INAPHIIQEI DGVKVALVKG EAKGVEVPSE YLLDVENGKR VVEEAIKSTE AALQRVKRER
EALERLYSEY SVYGDKRWDE HNDVATLIFY VLERDVKKVD DALVEFVRKN SAKLDIVKRV
RYKYIDRVPA ERRPTLEKYP APIRQFTKIV YMYGVPKPIE ISPVPLVALI FPVFFGWMYG
DLGHGSLLFL LGILLLTKLY GGRHRDWGVI WTITGLVSMF FGAFVYQEAF GFHLEEFGIH
LPTAPILPLF GHKTFVEVDG VKASLAAAFL LGFLLLLLAF LSKLINTVLK GEGDVALAIA
LPQLLFFFSL GMVFFSLIWQ PMGMYYLEPL MGLPWGYLAL LFIVWSAIGV VVIRARYRHH
EEAPPVVDEF IVGIVEGALG ALANIPSFSR LVILIMIHGV LTKLVNGVAL GLGAPGILFA
VFGHALIAAA EGLFSFVQSL RLVFYEVLSK FYEGKGRLFQ PLVLP
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