| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0519 |
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| Symbol | |
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| ID | 4908621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 493727 |
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| End bp | 495157 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640124266 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001055413 |
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| Protein GI | 126459135 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTC TAATCTCAGT CCTATTTCCA ATGATCCTTT CCTTTGTCGC ATACGCCGCG
GCCAAGAGGT CAGCCTACAT GGCCGGCTAC ATTTCGGCAG CAGCCTTACT GCCTCTACTC
GCCCTTTCTG CCTACGTCGT CTTTGGCGGA GTTGACCTTA GCGAGGGAAC CTTCCAAGGA
TTCGACGTTT TGGCATTTAG AATTATGCCG TTTAACGGCG TTTTTATATT CACAGTGGCG
CTTGTGGGGC TCTTTGTTGC CCTCTTCTCC CCGCCCTATA TGGAGCACAG AAGCCACGAG
CTGGGGAGAG ACTCCGCCGT GTTCTACTTG ACCTACGGCT TCTTTGTGGG AGGGCTTGCG
GGCGCCTTCG CCGCCGCCAA CTTAGTCGTG GTCTACGTAT TCATAGAGGT GGCCTTGATC
GCGTCGCTGT TCCAAATTTT GTACTACGGG TACGGAGACC GCGTGAGAAT TACGGTAATG
TACTTGGTCT GGTCCCACGT AGGCGCGTTT CTAGTACTGG CCGGGTTCCT ACTGCTCTAC
CTAAAAGGCG TCTACTATGT GCCGCTTTTG ATAGGCGGCA GAGGGACTGG GCCCGACGCC
CTGGCCTTTG TGCTCATACT CATAGGGTCT TTAATCAAGA TGGCTACTCT GGGCGTCCAC
ATGTGGCTTC CATACGTCCA CGCAGAGGCG CCTACGCCTC TGTCGGCGCT GCTGAGCCCA
GTCCTCGTAG GGATCGGTGG ATACTTAATA GCCTCCGTGG CCATGTACGT ACTGCCCAAC
AGCGAGTGGA CTCAGTGGCT CGTCTACTAC GCGGTGGCCA CCGCCATATA CGGGGGCCTA
ATGGCTTTTC TACAGAGGGA CATCAAGAGG CTATTTGCCT ACTCCACCGT GAGTCAAATG
GGCTACCTAC TGCTGGGGGT GGCCTTGGCC AACGTATATG GGTACACTGC GGCGGCCTTG
TTTTACCTAA GCCACGGCTT AGGCAAGGCG GTGCTCTTCA TGACCGCCGG CTACTTCATA
ATGTACTTGG GCACTCGCGA CGTGGAGAAA ATGGGCGGCC TCTACGGCTG GAGGCCTGAG
CTGGCCGGCG CAGCCATAGT GGGCTTCTTA AACCTCGCTG GGATATTAAG CATAGGCATG
ATCTCAGAAA TTACGCTCAC CGTAGGATAC GCCCAATACT TCCAGACCGA CTACGCCTTC
TACATACCCT ATGCGTTGGT GTTACTTGTG ACCGGAATCT ACGCCTTTAA CACAATACGC
GTGGTATTCT TTGGCCCTCC CAAGAGAGAG GACAGAGGAC CTGTGGATAT AGCGTTGGCG
TCCATCGTGG CCGTGGCCTT CATCTCACTG CTCCTCTTCA TACCGCCTTT CTCAAACACC
ATCGCAGACA ACATATATAA GGCCGTCGGT GCGGTGGGGC CATGGAGGTA A
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| Protein sequence | MMILISVLFP MILSFVAYAA AKRSAYMAGY ISAAALLPLL ALSAYVVFGG VDLSEGTFQG
FDVLAFRIMP FNGVFIFTVA LVGLFVALFS PPYMEHRSHE LGRDSAVFYL TYGFFVGGLA
GAFAAANLVV VYVFIEVALI ASLFQILYYG YGDRVRITVM YLVWSHVGAF LVLAGFLLLY
LKGVYYVPLL IGGRGTGPDA LAFVLILIGS LIKMATLGVH MWLPYVHAEA PTPLSALLSP
VLVGIGGYLI ASVAMYVLPN SEWTQWLVYY AVATAIYGGL MAFLQRDIKR LFAYSTVSQM
GYLLLGVALA NVYGYTAAAL FYLSHGLGKA VLFMTAGYFI MYLGTRDVEK MGGLYGWRPE
LAGAAIVGFL NLAGILSIGM ISEITLTVGY AQYFQTDYAF YIPYALVLLV TGIYAFNTIR
VVFFGPPKRE DRGPVDIALA SIVAVAFISL LLFIPPFSNT IADNIYKAVG AVGPWR
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