| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0506 |
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| Symbol | |
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| ID | 4908919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 484084 |
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| End bp | 484983 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124253 |
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| Product | SSU ribosomal protein S6P modification protein |
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| Protein accession | YP_001055400 |
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| Protein GI | 126459122 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATCG GCATTATTAG GCCGTACGAG GTGGAGTTTA ACCCGGGCGA CGTCTTGGAC
TTAGAGGAGG CGATTAGGAG GAGGGGTCAC TCGGCGGTGA GAGTTTACGT GGACATGTTG
GAGGTGAGGA TGGGGCCAAG CGGCGTCGAG GTGAGACACG CTGTAGGCAG AGAGGCGCCG
GCCCCCGTGG AGCTCGACGG GGCGTTGTTG CGCCACTTGG GCATTTTTAG AGACTTTGAG
CAGTTCTTAT ACAGGGTGTG GGCTGTGAGG GCGCTGGAGG AGGCCGGCGT ATACGTCATG
AACCCCGTAT TGCCGTGGGT AGTGGCTGGG GATAAAATGG CCGCCCTAAT GACGTTGTCT
AAGGCCGGCC TCCCCGTGCC CCCCACAGTG GTGACAGAGA ACATGTTCAT AGCGTATAGG
GCAGCGGGCG AGTTTGGAAA GGCGGTAGTT AAACAGATGC GCGGGGCCAT GGGCTACGGC
GCCTTTCTTG TGGAAGACCC CGACGTGGCC TTCCACATAT TCTCCATGTT GGTTAACATT
AACAAGCCTA TGTATGTGCA AAAGTTTTTG GAGAAGGGAG ACGGCGACTA TAGAGTGGTC
GTCGTGGGCA AGAGGGCCAT TGGCGCCGAG TATAGGCGGG CGGCTGGGTG GAAGAGCAAC
GTGGCTCAGG GCGCCAGGCC GGAGCCAGCG TATCTCACGC AGGAGCTGGA GGAGCTCGCC
GTCAAGGCCG TGGAGGTCTT GGGCTTAGAC TTCGGCGGAG TAGACATAGC GGAGACTAAG
GACGGCTACT ACATACTGGA GGTAAACCCA ACAATGAGTT GGCAGGGCTT TAAAGCCGCC
GTGGGTATAA ACCCGGCGGA GCACATCGTA GACCTCCTCC TGGAGAAAAT CAAGAGATGA
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| Protein sequence | MRIGIIRPYE VEFNPGDVLD LEEAIRRRGH SAVRVYVDML EVRMGPSGVE VRHAVGREAP
APVELDGALL RHLGIFRDFE QFLYRVWAVR ALEEAGVYVM NPVLPWVVAG DKMAALMTLS
KAGLPVPPTV VTENMFIAYR AAGEFGKAVV KQMRGAMGYG AFLVEDPDVA FHIFSMLVNI
NKPMYVQKFL EKGDGDYRVV VVGKRAIGAE YRRAAGWKSN VAQGARPEPA YLTQELEELA
VKAVEVLGLD FGGVDIAETK DGYYILEVNP TMSWQGFKAA VGINPAEHIV DLLLEKIKR
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